From: Marc Q. Ma (qma_at_oak.njit.edu)
Date: Fri Mar 18 2005 - 07:59:59 CST

JunJun,

> I want to know if VMD support a feature to select residues/atoms
> around a residue/atom within specified angstrom, say 3.5 angstrom.
> Thanks!

Try the following:

(resname CYS) and within 10 of (all not (protein or water))

The above selects all CYS residues within 10 AA of (...) which is the
heme structure in my protein/heme complex.

Marc

> Liu
>
> --
> JunJun Liu
>
> College of Chemistry
> Central China Normal University
> WuHan 430079
> P.R. China
>