VMD-L Mailing List

From: Aravinda Munasinghe (aravinda1879_at_gmail.com)
Date: Sun Nov 29 2020 - 08:56:43 CST

Also for analysis, you can use bigdcd function. Which allows you to do
analysis on a frame by frame basis.
Best,
AM

Aravinda Munasinghe

On Sat, Nov 28, 2020 at 6:18 PM Emma Wu <ewu20_at_illinois.edu> wrote:

> Hi Dr. Shabbir,
> You could use catdcd (https://www.ks.uiuc.edu/Development/MDTools/catdcd/)
> to shrink down the size of your trajectory files (ie. view every 10th or
> 100th frame).
>
> Best,
> Emma
>
> On Sat, Nov 28, 2020 at 2:29 PM Mi Yang <drmiyang2019_at_gmail.com> wrote:
>
>> Dear Colleagues,
>> while loading trajectory frames ~4000, VMD crashes due to large volume of
>> .dcd file
>> Any suggestion to tackle the problem?
>>
>> Dr Shabbir
>>
>