VMD-L Mailing List

From: Joshua Moore (jdmoore_at_ncsu.edu)
Date: Thu Mar 07 2019 - 23:33:35 CST

I think you might need to add "waitfor all" at the end of your addfile commands.

Sent from my iPhone

> On Mar 7, 2019, at 8:07 PM, Bennion, Brian <bennion1_at_llnl.gov> wrote:
>
> Does the vmd session crash? What is your hardware/OS that you are using for the textmode session?
>
> Brian
>
> From: owner-vmd-l_at_ks.uiuc.edu <owner-vmd-l_at_ks.uiuc.edu> On Behalf Of McGuire, Kelly
> Sent: Thursday, March 7, 2019 4:02 PM
> To: VMD Mailing LIst <vmd-l_at_ks.uiuc.edu>
> Subject: vmd-l: VMD Text Mode
>
> I am trying VMD text mode for the first time since I have really large DCD files. I tried loading my DCD, but it doesn't seem to load all of the frames. I do:
>
> mol new Simulation_QwikMD.psf type psf
> mol addfile MD1.dcd type dcd first 0 last -1 step 1
>
> There should be 90,000 frames, but i only loads ~3,200 frames. What am I doing wrong? Is VMD text mode still RAM dependent for DCD file sizes that can be loaded?
>
>
>
> Kelly L. McGuire
>
> PhD Candidate
>
> Biophysics
>
> Department of Physiology and Developmental Biology
>
> Brigham Young University
>
> LSB 3050
>
> Provo, UT 84602