From: CPMAS Chen (cpmasmit_at_gmail.com)
Date: Tue Jan 23 2018 - 11:38:16 CST

Thanks John.

it works.

On Tue, Jan 23, 2018 at 12:12 PM, John Stone <johns_at_ks.uiuc.edu> wrote:

> This is a very old script, but I think it should still work.
> It will let you use the secondary structure from the PDB rather
> than using the assignment made by STRIDE:
> http://www.ks.uiuc.edu/Research/vmd/script_library/
> scripts/vmd_use_pdb_ss/
>
> Best,
> John Stone
> vmd_at_ks.uiuc.edu
>
> On Tue, Jan 23, 2018 at 12:01:48PM -0500, CPMAS Chen wrote:
> > Thanks, John.Ā
> > Now I get it.Ā
> > Is there a way to manipulate STRIDE result in VMD? No error msg about
> > STRIDE.
> > The secondary structure might be just a little off as they are
> correctly
> > shown in pymol.
> > Charles
> > On Mon, Jan 22, 2018 at 5:03 PM, John Stone <[1]johns_at_ks.uiuc.edu>
> wrote:
> >
> > Hi,
> > Ā VMD uses STRIDE to compute secondary structure assignments--f403043854e40b206c0563750334--