VMD-L Mailing List

From: Suresh Ghimire (suresh.ghimire2049sg_at_gmail.com)
Date: Mon Dec 25 2017 - 22:29:46 CST

Dear VMD users,
 I am trying to build psf file combine to water and carbon nanotube, how
can I do that? and how can we set improper 0 for nanotube?

On Mon, Dec 18, 2017 at 9:47 PM, John Stone <johns_at_ks.uiuc.edu> wrote:

> Your best options are either to use the nanotube builder plugin
> included with VMD, or to learn how to use psfgen and build it yourself
> if you want to do something that the existing nanotube builder can't
> handle.
>
> Best,
> John Stone
> vmd_at_ks.uiuc.edu
>
> On Sun, Dec 17, 2017 at 06:42:45PM +0545, Suresh Ghimire wrote:
> > how can we build the PSF file for nanotube?
>
> --
> NIH Center for Macromolecular Modeling and Bioinformatics
> Beckman Institute for Advanced Science and Technology
> University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
> http://www.ks.uiuc.edu/~johns/ Phone: 217-244-3349
> http://www.ks.uiuc.edu/Research/vmd/
>