VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Fri May 15 2015 - 11:24:28 CDT

Hi,
  This refers to the first part of the filename that will be generated as the
NAMDEnergy plugin runs its calculations. The default is "namd", but you could
change it to "foo" or something else, it just needs to be something you're not
already using. You should also ensure that your current working directory is a
directory that is writeable.

Cheers,
  John Stone

On Fri, May 15, 2015 at 07:10:45PM +0530, Debashis Kundu wrote:
> Hello VMD users,
> My name is Debashis. I am new user of VMD. I am facing problem in NAMD
> energy plugin of VMD. I have successfully generated psf file and ran NAMD
> simulation. I am confused over the "Temp File Prefix" option in NAMD
> Energy. What would be the appropriate file to import in Temp File Prefix
> and how to generate it?Â
> I will appreciate any suggestion from the community.
> Regards,
> Debashis 

-- 
NIH Center for Macromolecular Modeling and Bioinformatics
Beckman Institute for Advanced Science and Technology
University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
http://www.ks.uiuc.edu/~johns/           Phone: 217-244-3349
http://www.ks.uiuc.edu/Research/vmd/