VMD-L Mailing List

From: Richard Wood (Richard.Wood_at_purduecal.edu)
Date: Mon Nov 24 2014 - 12:48:33 CST

Does one want to simulate an amino acid cocktail like what is given when one's core temperature drops too low to drive protein synthesis and raise the patient's core temp?

Richard
________________________________
From: owner-vmd-l_at_ks.uiuc.edu [owner-vmd-l_at_ks.uiuc.edu] on behalf of Ajasja Ljubeti [ajasja.ljubetic_at_gmail.com]
Sent: Monday, November 24, 2014 10:54 AM
To: Kevin C Chan
Cc: VMD Mailing List
Subject: Re: vmd-l: A box of amino acids

I think you could use the solvate plugin, with the amino acids as custom solvent.
Also, perhaps you will find http://www.ime.unicamp.br/~martinez/packmol/ useful.

Best regards,
Ajasja