VMD-L Mailing List

From: Puspita Halder (puspitah_at_gmail.com)
Date: Wed Jun 25 2014 - 08:23:56 CDT

Dear VMD users,

I need to generate the secondary structure of my protein from a 50 ns
simulation run. I used sscache earlier for 2-4 ns simulations of the
protein. Now the file sizes are huge (~ 50 GB) so I assume that I cannot
directly use sscache. I tried to combine sscache with bigdcd.tcl script but
failed to do so. Please help me with your valuable suggestions regarding
this. Is there any ready script available ?

Thanks
Puspita