VMD-L Mailing List
From: yp sun (sunyeping_at_yahoo.com.cn)
Date: Sun Apr 21 2013 - 21:40:19 CDT
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Dear VMD users,
I want to calculation the free energy of a peptide binding to a protein and the energy contribution of individual residues of the peptide. I have finished namd simulation, could anyone help me with that? where can I find the scripts to realize it?
Best regards,
Yeping Sun
CAS Key Laboratory of Pathogenic Microbiology & Immunology
INSTITUTE OF MICROBIOLOGY CHINESE ACADEMY OF SCIENCES
NO.1 Beichen West Road,Chaoyang District,Beijing 100101,china
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- Reply: Axel Kohlmeyer: "Re: how to calculate binding free energy and contribution of individual residue?"
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