VMD-L Mailing List
From: santhu kumar (mesanthu_at_gmail.com)
Date: Mon May 07 2012 - 11:10:40 CDT
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Hey Albert,
DSSP has classified secondary structure elements into different categories.
I would think they represent it.
http://en.wikipedia.org/wiki/Protein_secondary_structure : Look into the
DSSP code.
Cheers,
Santhosh
On Mon, May 7, 2012 at 10:07 AM, Albert <mailmd2011_at_gmail.com> wrote:
> hello:
>
> I've plot the 2nd structure by Time-line in VMD 1.91. and I found the
> plot is in different colors. What does those corresponding letter caption
> for different colors such as:
>
> T E B H G I C ?
>
> probably B for beta-strand and H for Helix? what about the left?
>
> thank you very much
> Albert
>
>
>
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