VMD-L Mailing List
From: Molybdos Kirkimpolakis (supercomputer.simulation_at_gmail.com)
Date: Mon Feb 13 2012 - 15:53:15 CST
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Dear VMD Masters,
I was wondering how can I get the "Timestep" of each frame of my simulation
after the files are loaded in vmd.
In addition I was also wondering how to use hbond command. When I type
set protein [atomselect top protein]
measure hbonds 3.5 30 protein
I got a long list of numbers, Can anyone explain what it means or make an
example of how to use it?
I cannot use the pulgin, because I only have access to a cluster where I
can only run commands and no a graphical version of vmd.
Thanks so much for your help!!
-- cheers Molybdos Kirkimpolakis Πανεπιστήμιο Πατρών <http://www.biology.upatras.gr> ΤΜΗΜΑ ΒΙΟΛΟΓΙΑΣ
- Next message: Axel Kohlmeyer: "Re: radial distribution funtion"
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