VMD-L Mailing List
From: sajad falsafi (sajad.falsafi_at_yahoo.com)
Date: Fri Jul 15 2011 - 11:51:28 CDT
- Next message: Edward Lyman: "autoionize adds too many ions"
- Previous message: maria goranovic: "angle between two domains connected at a hinge"
- In reply to: maria goranovic: "angle between two domains connected at a hinge"
- Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]
Hi,
you can use the hingefind script.
http://www.biomachina.org/disseminate/hingefind/hingefind.tcl
http://biomachina.org/disseminate/hingefind/hingefind_tcl.html
Hope this helps you
Sajad & Zahra
________________________________
From: maria goranovic <mariagoranovic_at_gmail.com>
To: VMD list <vmd-l_at_ks.uiuc.edu>
Sent: Fri, July 15, 2011 6:05:52 PM
Subject: vmd-l: angle between two domains connected at a hinge
Dear Friends
There must be several tools to calculate the angle between two domains connected
at a hinge. I was wondering if someone has suggestions on any tools, or whether
it is possible to do this using a vmd plugin directly for a trajectory? IN my
case, I have a reasonable good idea where the hinge is. Does anyone have
experience with hingefind, for example?
--
Maria G.
Technical University of Denmark
Copenhagen
- Next message: Edward Lyman: "autoionize adds too many ions"
- Previous message: maria goranovic: "angle between two domains connected at a hinge"
- In reply to: maria goranovic: "angle between two domains connected at a hinge"
- Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]