VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Tue Jun 21 2011 - 13:15:44 CDT

Hi,
  Have you tried yet?
Almost all scripts should work on all platforms. Some scripts may
have bugs in them that cause problems when writing filenames containing
spaces, but other than that, I would expect things to be essentially
the same for all platforms. If you encounter such a script that
doesn't like path names containing spaces, just use a working directory
that doesn't have any spaces and the script should work fine.
If you have a specific question or problem with using "orient"
or other scripts, let us know.

Cheers,
  John Stone
  vmd_at_ks.uiuc.edu

On Thu, Jun 16, 2011 at 06:33:51PM +0900, Masaki UNNO wrote:
> Dear all
>
>
>
> Does anyone know how to use "orient" script in Windows Vista? Can we use
> the script in Windows? If yes, please give me the advice.
>
> I would like to know the `domain twist' in a protein molecule as seen in
> the work by Birdsey-Benson and her colleagues (2010), J. Neurosci. 30,
> 1463-1470.
>
> http://www.ncbi.nlm.nih.gov/pubmed/20107073
>
>
>
> Best regards
>
>
>
>
>
> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
>
> Masaki UNNO, Ph.D.
>
>
>
> Frotier Research Center for Applied Atomic Sciences,
>
> Ibaraki University
>
>
>
> Ibaraki Quantum Beam Research Center
>
> 162-1 Tokai, Shirakata, Naka, Ibaraki 319-1106, Japan
>
> Tel: 029-352-3239, Fax: 029-287-7872
>
> E-mail: unno19_at_mx.ibaraki.ac.jp
>
> HP: http://www.fas.ibaraki.ac.jp/?page_id=961
>
>
>
> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 

-- 
NIH Resource for Macromolecular Modeling and Bioinformatics
Beckman Institute for Advanced Science and Technology
University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
http://www.ks.uiuc.edu/~johns/           Phone: 217-244-3349
http://www.ks.uiuc.edu/Research/vmd/       Fax: 217-244-6078