From: Eduard Schreiner (eduard.schreiner_at_gmail.com)
Date: Thu May 19 2011 - 12:07:00 CDT

Axel's reply would work for that one too

eddi

On Thu, May 19, 2011 at 6:37 PM, ban arn <ban.arn_at_gmail.com> wrote:

> Dear VMD users
>
> Thnaks for reply.
>
> It works fine.
>
> I can pose the question in another way.
>
> Is it possible to align the trajectories of two proteins of varying atom
> numbers according to backbone in VMD.
>
> Many Thanks
> Balaji
>
>
> On Thu, May 19, 2011 at 5:31 PM, Joseph Bylund <joseph.bylund_at_gmail.com>wrote:
>
>> The stamp structural alignment in extensions->analysis->multiseq sounds
>> like what you're looking for.
>>
>>
>> On 05/19/2011 11:43 AM, ban arn wrote:
>>
>>> Dear VMD users
>>>
>>> Is it possible to align two proteins of varying atom numbers according to
>>> backbone in vmd.
>>>
>>> Kindly advice
>>>
>>> Many Thanks
>>> Balaji
>>>
>>>
>