VMD-L Mailing List

From: Axel Kohlmeyer (akohlmey_at_gmail.com)
Date: Thu Feb 17 2011 - 10:15:08 CST

dear julie,

thanks a _lot_ for trying out the beta and reporting this problem.
this is _exactly_ what beta test versions are for and i can only
encourage everybody to give it a shot and let us know where
the rough edges are. this will help a lot.

cheers,
     axel.

On Thu, Feb 17, 2011 at 10:21 AM, Julie Grouleff <jg_at_chem.au.dk> wrote:
> I am trying to use the new option of building CHARMM36 bilayers with vmd 1.9
> beta, but I get the following error every time I use the plugin:
>
>  ERROR: Unable to open psf file
> /usr/local/lib/vmd/plugins/noarch/tcl/membrane1.0/popc36_box.psf

> I can't find the file popc36_box.psf anywhere. Where should I find it?
>
> /Julie
> Ph.D. student
> Biomodelling Group
> Department of Chemistry
> Aarhus University
>
> -----Original Message-----
> From: owner-vmd-l_at_ks.uiuc.edu [mailto:owner-vmd-l_at_ks.uiuc.edu] On Behalf Of
> John Stone
> Sent: 16. februar 2011 02:27
> To: vmd-l_at_ks.uiuc.edu
> Cc: vmd_at_ks.uiuc.edu
> Subject: vmd-l: VMD 1.9 beta 1 posted for download...
>
> Dear VMD-L,
>  I've just posted VMD 1.9 beta 1 for download.
> At the present time I've only posted binaries for the mainstream Linux,
> MacOS X, Solaris, and Windows platforms, but more platforms will become
> available in the next beta release.
>
> Beta 1 is nearly feature-complete, with just a few items expected to be
> added before release, but it is largely representative of what the final 1.9
> release will look like.
>
> If you have trouble downloading, installing, or running the beta versions,
> please let me know.
>
> The full changelog for this beta version is posted here:
>  http://www.ks.uiuc.edu/Research/vmd/vmd-1.9/devel.html
>
> I will be preparing a more concise page that summarizes the new features of
> VMD 1.9 over the next several days.  There have been many improvements to
> the high-quality rendering related features of VMD, improved support for
> acceleration with GPUs and multi-core CPUs, support for MPI-based parallel
> analysis scripting, and many of the VMD plugins have been significantly
> updated and/or improved.
>
> Cheers,
>  John Stone
>  vmd_at_ks.uiuc.edu
>
> --
> NIH Resource for Macromolecular Modeling and Bioinformatics Beckman
> Institute for Advanced Science and Technology University of Illinois, 405 N.
> Mathews Ave, Urbana, IL 61801
> Email: johns_at_ks.uiuc.edu                 Phone: 217-244-3349
>  WWW: http://www.ks.uiuc.edu/~johns/      Fax: 217-244-6078
>
>
> 

-- 
Dr. Axel Kohlmeyer
akohlmey_at_gmail.com  http://goo.gl/1wk0
Institute for Computational Molecular Science
Temple University, Philadelphia PA, USA.