VMD-L Mailing List
From: Francesco Pietra (chiendarret_at_gmail.com)
Date: Fri Nov 20 2009 - 05:12:35 CST
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Hi:
In order to water solvate a cg protein (cg pdb abd psf available) with
VMD1.8.7 I am following Anton's advice to solvate with gc water
instead of cg an "all-atom protein water system", using the files that
Anton has put on the web:
cgsolvate.tcl
cgwat.pdb
cgwat.psf
I tried to use cgsolvate.tcl in place of solvate.tcl. If cgsolvate.tcl
is added to
/usr/local/lib/vmd/plugins/noarch/tcl/solvate1.3
it is not seen by the command
package require ...
Then I put cgsolvate.tcl in my working directory. Command
source cgsolvate.tcl
reported
conflicting versions provided for package "solvate": 1.3, then 1.2.
I would appreciate very much instructions. Thanks
francesco pietra
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