VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Mon Feb 16 2009 - 11:43:44 CST

Hi,
  What platform are you running on, and which version of VMD is this
email referring to?

Cheers,
  John Stone
  vmd_at_ks.uiuc.edu

On Mon, Feb 16, 2009 at 12:23:32PM -0500, Yinglong Miao wrote:
> Dear VMD developers/users,
>
> I have been running a VMD script that involves loading PSF/PDB files and
> writing DCD files for a pretty large system (~3M atoms). The program seems
> to run fine with files processed properly, but error messages like "***
> glibc detected *** free(): invalid pointer: 0x00000000102a8f28 ***" keep
> coming up during the program running. I am not sure whether it comes from
> large system processing or something regarding memory. I looked it up in the
> list archives but found no clue. Has anyone come into such cases? Your help
> will be appreciated!
>
> Thanks!
>
> --
> Yinglong Miao
> Ph.D. Candidate
> Center for Cell and Virus Theory
> Chemistry Department, Indiana University
> 800 E Kirkwood Ave Room C203A, Bloomington, IN 47405
> Tel: 1-812-856-0981 

-- 
NIH Resource for Macromolecular Modeling and Bioinformatics
Beckman Institute for Advanced Science and Technology
University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
Email: johns_at_ks.uiuc.edu                 Phone: 217-244-3349
  WWW: http://www.ks.uiuc.edu/~johns/      Fax: 217-244-6078