VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Mon Feb 09 2009 - 00:06:46 CST

Bo,
  I believe you're supposed to select that atoms that
are mobile (i.e. not fixed). Thus the default value of "all".

Cheers,
  John

On Mon, Feb 09, 2009 at 09:17:15AM +1100, bo baker wrote:
> Hi, VMD:
>
> I would lile to use NAMD GUI interface to set up energy minimization
> on side chains with CA fixed. Which words should be typed in the
> "select fix and mobile atom"?
>
> Thank you for your advice
>
> Bo 

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NIH Resource for Macromolecular Modeling and Bioinformatics
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