VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Tue Aug 19 2008 - 01:02:57 CDT

Hi,
  You should be able to make some trivial modifications to
the script provided in the tutorial to achieve what you have
in mind. If you're not familiar with Tcl scripting yet, please
have a look at the various information on www.tcl.tk, or
read through the VMD tutorials to become more familiar.

Cheers,
  John Stone
  vmd_at_ks.uiuc.edu

On Mon, Aug 11, 2008 at 11:52:14AM -0700, Shadi Mirzae wrote:
> Dear all,
> when we use the residue_rmsd.tcl for calculating the the rmsd ,we get a file in the end,which gives the average rmsd  for each residue in all of the frames.butI like to have the rmsd for each residue in all of the frames ,instead of having average.Is it possible.
>  
> thanks
>
> 

-- 
NIH Resource for Macromolecular Modeling and Bioinformatics
Beckman Institute for Advanced Science and Technology
University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
Email: johns_at_ks.uiuc.edu                 Phone: 217-244-3349
  WWW: http://www.ks.uiuc.edu/~johns/      Fax: 217-244-6078