VMD-L Mailing List

From: Justin Gullingsrud (justin_at_ks.uiuc.edu)
Date: Wed May 16 2001 - 15:58:26 CDT

One way to do it might be to select one of the residues in the active site,
then color all other residues that are near that residue. If one of the
active site residues is 42, you could select:

        same residue as (within 3 of resid 42)

and give that representation a particular color.

Justin

On Wed, May 16, 2001 at 01:26:01PM -0700, B. Bennion wrote:
> Hello,
>
> I have a enzyme with an active site that I would like to differentiate
> from the rest of the protein with color. I could not find anything in the
> manual referring to coloring discontinuous sections of protein.
>
> Regards,
> Brian Bennion
>
>
>
>
>
> Graduate Research Assistant
> Dep. Medicinal Chemistry, University of Washington
> Tel# (206)616-2779
> BOX 357610 Seattle WA 98195
>
> email--bbennion_at_u.washington.edu
> web page--http://students.washington.edu/bbennion 

-- 
Justin Gullingsrud      3111 Beckman Institute
H: (217) 384-4220       I got a million ideas that I ain't even rocked yet...
W: (217) 244-8946       -- Mike D