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VMD User's Guide

Version 1.9.4a48

October 13, 2020

NIH Biomedical Research Center for Macromolecular Modeling and Bioinformatics

Theoretical and Computational Biophysics Group
Beckman Institute for Advanced Science and Technology
University of Illinois at Urbana-Champaign
405 N. Mathews
Urbana, IL 61801


The VMD User's Guide describes how to run and use the molecular visualization and analysis program VMD. This guide documents the user interfaces displaying and grapically manipulating molecules, and describes how to use the scripting interfaces for analysis and to customize the behavior of VMD.

VMD development is supported by the National Institutes of Health grant numbers NIH P41-GM104601.