Computational Biophysics Workshop - Jülich, August 15-19, 2016
Even though the tutorials will be held in computer
course rooms, we strongly encourage
participants to bring their own laptops and install most of the
required software in advance.
We will have two class rooms (equipped with 24 + 28 computers),
but the overall computational resources will be limited
(e.g. the larger room runs a virtualized system with on average
only about one cpu-core per user).
There will be eduroam wireless network available on campus.
If you do not use eduroam or want to get access to the
WLAN of the research center, please send us your
MAC address (of the wireless network adapter) so we can
register you in advance and save time during the workshop.
Install Software
- MDFF (Ryan McGreevy / ryanmcgreevy@ks.uiuc.edu )
- VMD (current version is 1.9.2, but there might be a new release right before the workshop starts)
- NAMD (latest version)
- PHENIX (latest official release)
- Rosetta (Frank DiMaio / dimaio@uw.edu )
- Rosetta (latest build)
- DireX (Gunnar Schroeder / gu.schroeder@fz-juelich.de )
- For the model refinement tutorial:
- DireX 0.7 (rev406)
- For the model building tutorial we need in addition:
- Modeller 9.17
- UCSF Chimera
- EMAN2.12
- PHENIX (latest official release)