Computational Biophysics Workshop - Urbana, Illinois, September 25-29, 2017

Lectures

(video playlist)

Applications of Enhanced Sampling and Free Energy Calculation Methods - Emad Tajkhorshid [lecture slides]

 

 

Introduction to Free Energy Calculations - Chris Chipot [lecture slides]

 

 

Transition Path Sampling and Free Energy Calculations - Chris Chipot [lecture slides]

 

 

Constant pH Molecular Dynamics with NAMD - Brian Radak [lecture slides]

 

 

Geometrical Free Energy Methods - Giacomo Fiorin [lecture slides]

 

 

Designing Implementing and Optimzing Collective Variables in VMD and NAMD - Giacomo Fiorin [lecture slides]

 

 

Specialized Algorithims for Enhanced Ergodic Sampling - Chris Chipot [lecture slides]

 

 

Accelerating Convergence of Free Energy Calculations - Wei Jiang [lecture slides]

 

 

Adaptive Multilevel Splitting Method Isomerization - Laura Lopes [lecture slides]

 

 

Exploring Complex Reaction Pathways I - Mahmoud Moradi [lecture slides]

 

 

Exploring Complex Reaction Pathways II - Mahmoud Moradi [lecture slides]