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Tutorial-l Mailing List

From: Ehsan Nikbin (ehsan.nikbin_at_yahoo.com)
Date: Mon Dec 02 2013 - 09:24:19 CST

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 Is there any problem with using NAMD 2.9 for residue based coarse graining? Tutorial says that you need "Nightly Build" of NAMD or NAMD 2.10, but the MARTINI residue based coarse grain force field is also defined in NAMD 2.9 and even NAMD 2.8. In addition when I opened the log file of the simulations in example output of the tutorial files I saw it has been done with NAMD 2.8. so why the tutorial says that you need "Nightly Build" of NAMD or NAMD 2.10?
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