From: Bharath Rajeswaran (
Date: Wed Jun 02 2010 - 04:31:51 CDT


   I am a new NAMD user. I am trying to run an MD simulation of a polymer
with glucose as monomer. I do not know how to develop the topology file for
the molecule other than that listed in the topology file. I am using CHARMM.
I request you to suggest me how to develop topology files for molecules not
in the topology files.



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