Computational Biophysics Workshop - Perth, Jun. 7-18, 2004
TCB Hands-on Workshop in Perth
Tutorials
Below is a list of the tutorials used at the summer school.
Please click here to see a
page with the updated versions of these tutorials.
- Molecular Graphics Tutorial
An introduction to VMD and its capabilities
- Bioinformatics
Tutorial on using Bioinformatics to classify protein domains and align determined protein domains structurally
- Evolution of Aspartyl-tRNA Sythetase
A tutorial that uses structural and sequence alignment to learn about the
evolution of tRNAases.
- Molecular Dynamics Tutorial
An introduction to NAMD and its capabilities
- Stretching Deca-Alanine Tutorial
An introduction to IMD and SMD simulations with VMD and NAMD
- Nanotubes tutorial
A tutorial simulating water diffusion and permeation through nanotubes
- Aquaporins tutorial
A tutorial that uses Bioinformatics tools within VMD to find important
structural features in aquaporins from evolutionary studies
- Determining Force Fields
Tutorial on determining new force field parameters to describe novel system components of a new molecule