C. Keith Cassidy
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I am now a post-doc in the Biochemistry Department at the University of Oxford. Email:
keith.cassidy@bioch.ox.ac.uk Personal Website:
ckcassidy.com TCBG webpage:
Bacterial Chemotaxis |
Education
- Ph.D. in Physics, University of Illinois at Urbana-Champaign, 2016
- M.S. in Physics, University of Illinois at Urbana-Champaign, 2013
- B.S. in Physics, University of Arkansas, 2010
Research Interests
- Molecular architecture of bacterial chemosensory arrays (Left).
- Molecular mechanisms of coopertive signal transduction within array.
- Physical principles of biological information processing.
EMD-6319 by Sketchfab For Science on Sketchfab
Publications
- CryoEM-based Hybrid Modeling Approaches for Structure Determination
- GPU-accelerated molecular dynamics clustering analysis with openACC
- Computational Methodologies for Real-Space Structural Refinement of Large Macromolecular Complexes
- CryoEM and computer simulations reveal a novel kinase conformational switch in bacterial chemotaxis signaling
- Molecular dynamics simulations of large macromolecular complexes
- CheY's acetylation sites responsible for generating clockwise flagellar rotation in Escherichia coli
Cassidy C.K., Himes B.A., Luthey-Schulten Z., Zhang P., Current Opinion in Microbiology, 2017
Stone J.E., Perilla J.R., Cassidy C.K., Schulten K., In Parallel Programming with openACC, Elsevier, 2016
Goh B.C., Hadden J.A., Bernardi R.C., Singharoy A., McGreevy R., Rudack T., Cassidy C.K., Schulten K., Annual Review of Biophysics, Vol. 45, 2016
*Cassidy C.K., *Himes B.A., *Alvarez J.A., Ma J., Zhao G., Perilla J.R., Schulten K., Zhang P., eLife, 2015
Perilla J.R., Goh B.C., Cassidy C.K., Liu B., Bernardi R.C., Rudack T., Yu H., Wu Z., and Schulten K., Current Opinion in Structural Biology, 31:64-74, 2015
Top 10 most downloaded articles as of Aug 2015
Fraiberg M., Afanzar O., Cassidy C.K., Gabashvili A., Schulten K., Levin Y., Eisenbach M., Molecular Microbiology, 95:231-244, 2015
Selected for Faculty of 1000 Prime
Presentations
- Modeling and Simulation of the Bacterial Chemosensory Array
- Transmembrane Signaling in E.coli Tsr receptor.
Blue Waters Symposium. 2017. Sunriver, Oregon (Talk)
Gordon Research Conference: Sensory Transduction in Microorganisms. 2016. Ventura Beach, California (Invited Talk)
Gordon Research Seminar: Sensory Transduction in Microorganisms. 2016. Ventura Beach, California (Poster)
Medical Microbiology and Immunology Seminar. 2015. University of Wisconsin, Madison (Invited Talk)
Biophysical Society 59th Annual Meeting. 2015. Baltimore, Maryland (Poster)
Bacterial Signaling and Locomotion XIII. 2015. Tucson, Arizona (Invited Talk)
Receptor Fest 17th Annual Meeting. 2014. Salt Lake City, Utah (Talk)
Blue Waters 2nd Annual Symposium. 2014. Urbana, Illinois (Talk)
Biophysical Society 58th Annual Meeting. 2014. San Francisco, California (Poster)
SOPS 4th Annual Postdoctoral Research Symposium. 2014. Urbana, Illinois (Poster)
Beckman Institute Graduate Student Seminar. 2013. Urbana, Illinois (Talk)
Receptor Fest 20th Annual Meeting. 2017. Salt Lake City, Utah (Talk)
Receptor Fest 19th Annual Meeting. 2016. Santa Barbara, California (Talk)
Receptor Fest 18th Annual Meeting. 2015. Boulder, Colorado (Talk)
In The News
Protein Data Bank
