Modeling of Cryo-EM map Workshop - Houston, Jan. 14-17, 2010

TCB Hands-on Workshop in Pittsburgh

Program

Taken from NCMI workshop agenda.

Thursday, Day 1 (January 14, 2010)

08:30 am-09:00 am Registration, set-up and breakfast
09:00 am-10:30 am Matthew Baker (Baylor College of Medicine) and Tao Ju (Washington U, St Louis): SSEHunter and de novo modeling from cryo-EM maps
10:30am -11:00 am Break
11:00 am -12:15 pm Frank DiMaio and David Baker (U of Washington, Seattle): Model refinement of cryo-EM maps using Rosetta
12:15 pm -1:45 pm Lunch
1:45 pm -3:15 pm Matthew Baker and Tao Ju: Gorgon
3:15 pm -3:45 pm Break
3:45 pm -5:45 pm Frank DiMaio: Rosetta
6:00 pm Dinner - BBQ at the conference site
7:30 pm - 8:30 pm Helen Berman: General discussion on model deposition to Protein Data Bank or EBI

 

Friday, Day 2 (January 15, 2010)

9:00 am - 11:45 am Klaus Schulten (U of Illinois): Molecular dynamics based modeling of cryo-EM maps (lunch will be served prior to Ada Yonath's lecture)
12:00 noon Ada Yonath: Lecture on "The Amazing Ribosome" Rockwell Pavilion, MD Anderson Library (lunch will be served)
1:30 pm - 5:30 pm Klaus Schulten: Molecular dynamics modeling
6:00 pm - 8:30 pm Dinner at the University of Houston Alumni Center

 

Saturday, Day 3 (January 16, 2010)

9:00 am – 10:15 am Andrej Sali (UCSF): Protein assembly modeling guided by cryoEM maps: homology, flexibility and architecture
10:15 am – 10:45 am Break
10:45 am – 12:00 pm Gunnar Schroeder (Forschungszentrum Juelich) and Michael Levitt (Stanford U): Model refinement with low resolution density maps
12: 00 pm – 1:30pm Lunch
1:30 pm – 3:15 pm Ben Webb and Keren Lasker: IMP and Modeller: MultiFit and FlexEM
3:15 pm – 3:45 pm Break
3:45 pm – 5:30 pm Gunnar Schroeder and Michael Levitt: Modeling
7:00 pm Workshop Banquet at Treviso’s, 6550 Bertner St., Houston, TX 77030

 

Sunday, Day 4 (January 17, 2010)

9:00 am – 10: 00 am Cathy Lawson and Helen Berman (Rutgers U): Model deposition
10:00 am – 11:00 am Other presentations
11:00 am – 5:00 pm Instructors and Participants: Independent projects

Workshop supported by NIH P41-RR005969 "Resource for Macromolecular Modeling and Bioinformatics".