Computational Biophysics Workshop - Atlanta, Nov. 3-7, 2014
Lectures
PDF versions of the lecture slides will be posted here.
- 11/3: Introduction to Protein Structure and Dynamics - Klaus Schulten
- 11/4: Free Energy Calculations - Chris Chipot
- Introduction to Free-energy Calculations (parts 1 and 2) (PDF)
- 11/5: Force Field Parameterization - Emad Tajkhorshid & James Gumbart
- Introduction to Topology, Parameters, and Structure Files (PDF)
- Examples and Applications / Force Field Toolkit (PDF)
- 11/6: Simulating Membrane Proteins - Emad Tajkhorshid
- Membrane Simulation with NAMD & Transport in Membrane Channels (PDF)
- 11/7: Advanced Methods - James Gumbart