New Shape-Based Coarse Graining Tutorial
The Theoretical and Computational Biophysics Group is pleased to announce the availability of the Shape-Based Coarse Graining tutorial. This tutorial presents one method of coarse-graining, called shape-based coarse-graining, which has been quite successful in a number of applications. In this method, a small number of CG beads are used to represent overall shapes of proteins or lipid membranes, with typical ratio of 200-500 atoms per bead. Requires VMD, NAMD, and a plotting program. Tutorial works on Windows, Mac, and Unix/Linux platforms.
The tutorial consists of a text in pdf format and files used in the tutorial, available below: