Structural Biology Software Database
Structural Biology Software Database

Application Index Record

Category: Gene and Protein Sequence Alignment, Phylogenetic Search and Analysis
FPS (Family Pairwise Search)
Last Update: 12-29-2000

Description:
FPS is a web-based program which allows you to search a library of protein families with a protein sequence, GCG profile or BLAST checkpoint file that you provide. Your query will be analyzed at the San Diego Supercomputer Center using the Family Pairwise Search (FPS) algorithm, a method for scoring a biological sequence, GCG profile or BLAST checkpoint file against a family of sequences.

Homepage:
http://fps.sdsc.edu/

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