ECE498 Project: Molecular Surface Computation
Density Map Synthesis
- A Generalization of Algebraic Surface Drawing
- Intro to Metaballs, Steve Hollasch
- Partial CUDA implementation of Blinn's "blob" electron density map synthesis equation computed on a grid
- VMD VolMapCreate classes
- VMD isosurface extraction class
- VMD volumetric map management class
- VMD isosurface rendering class
- VMD volumetric texturing class
- VMD CUDA potential map class (use as a guide for getting high performance for density synthesis..)
- VMD Threads
- VMD DX volumetric map reader/writer plugin (use this format for density map reading/writing)
- VMD XYZ atomic structure file reader/writer plugin (use this format for atomic structure reading/writing)
Isosurface Extraction
- Marching cubes: A high resolution 3D surface construction algorithm
- Discretized marching cubes
- Regularised Marching Tetrahedra: Improved Iso-surface Extraction
- Efficient implementation of Marching Cubes' cases with topological guarantees
- VMD Isosurface class
- Polygonising a scalar field
- OpenGL Geometry Shader Marching Cubes
- NVIDIA Sample:DX10: Practical Metaballs and Implicit Surfaces
- NVIDIA Sample:OpenGL/Cg Isosurf
- Microsoft Sample:Blobs Sample
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