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The sequence viewer is used to list the residue sequences of proteins
and the base sequences of nucleic acids, and to select residues/bases
from the sequence list for highlighting in the 3-D structure in the
main VMD window.
When residues are selected in the main VMD window, the corresponding
residue is highlighted in the sequence list in this form. Color-coded
protein structure information is displayed for amino-acid residues,
and B-factor information is displayed for all residues. In this section,
``residues'' refers both to amino acid residues in proteins, and to
nucleotide bases with associated backbone in DNA and RNA molecules.
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