Paper Citing NAMD - Abstract
Gillespie, C. M.; Asthagiri, D.; Lenhoff, A. M.
Polymorphic Protein Crystal Growth: Influence of Hydration and Ions in Glucose Isomerase
CRYSTAL GROWTH & DESIGN, 14:46-57, JAN 2014
Crystal polymorphs of glucose isomerase were examined to characterize the properties and to quantify the energetics of protein crystal growth. Transitions of polymorph stability were measured in poly(ethylene glycol) (PEG)/NaCl solutions, and one transition point was singled out for more detailed quantitative analysis. Single-crystal X-ray diffraction was used to confirm space groups and identify complementary crystal structures. Crystal polymorph stability was found to depend on the NaCl concentration, with stability transitions requiring >1 M NaCl combined with a low concentration of PEG. Both salting-in and salting-out behavior was observed and was found to differ for the two polymorphs. For NaCl concentrations above the observed polymorph transition, the increase in solubility of the less stable polymorph together with an increase in the osmotic second virial coefficient suggests that changes in protein hydration upon addition of salt may explain the experimental trends. A combination of atomistic and continuum models was employed to dissect this behavior. Molecular dynamics simulations of the solvent environment were interpreted using quasi-chemical theory to understand changes in protein hydration as a function of NaCl concentration. The results suggest that protein surface hydration and Na+ binding may introduce steric barriers to contact formation, resulting in polymorph selection.
