VMD-L Mailing List

From: Peter Mawanga (peter.mawanga.lagos_at_gmail.com)
Date: Mon Mar 21 2022 - 09:30:57 CDT

Dear VMD developers and users,

Is it possible to compute the following distances using GROMACS?

(A) Perpendicular distance of a point from the principal axis of a group of
atom positions

(B) Vertical movement of a point along the principal axis of a group of
atom positions

Please refer to the attached figure for reference. Kindly feel free to
suggest alternative tools that can be used for these calculations. 

-- 
Cheers
Peter

principal_axis.png