VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Thu Jul 17 2008 - 09:21:29 CDT

I should have been more specific, what precise build of VMD are
you using, e.g.:
Info) VMD for LINUX, version 1.8.7a30 (June 20, 2008)

The key thing I'm looking for (since you already said it's 1.8.6)
is whether you're running the 32-bit "LINUX", 64-bit "LINUXAMD64",
etc.

Cheers,
  John Stone
  vmd_at_ks.uiuc.edu

On Thu, Jul 17, 2008 at 10:13:14AM -0400, Katherine Parra wrote:
> In VMD console startup:
>
> Refrences
> Free System Memory
> OpenGL renderer: GeForce2 MX/AGP/SSE2
> Features: STENCIL MDE MTX PP PS
> GLSL rendering mode is not available.
> Textures: 2-D (2048x2048), 3-D (64x64x64), Multitexture (2)
>
> On Wed, Jul 16, 2008 at 3:19 PM, John Stone <johns_at_ks.uiuc.edu> wrote:
>
> >
> > Hi,
> > One other item, what version of VMD 1.8.6 do you have installed?
> > (show me the startup messages you're getting)
> >
> > John
> >
> > On Wed, Jul 16, 2008 at 03:06:06PM -0400, Katherine Parra wrote:
> > > I downloaded pylib.linux.tar.gz<
> > http://www.ks.uiuc.edu/Research/vmd/plugins/pythonlib/vmd-1.8.4/pylib.linux.tar.gz
> > >
> > > the library that matched the version of VMD that I'm using 1.8.6
> > > KP
> > >
> > > On Wed, Jul 16, 2008 at 2:28 PM, John Stone <johns_at_ks.uiuc.edu> wrote:
> > >
> > > >
> > > > Hi,
> > > > Did you download the libraries that match the version of VMD you're
> > using?
> > > > (both the VMD version number, and also the right 32-bit 64-bit libs?)
> > > > If you tell me the details of your installation and what you've
> > installed
> > > > I should be able to assist you.
> > > >
> > > > John Stone
> > > > vmd_at_ks.uiuc.edu
> > > >
> > > > On Wed, Jul 16, 2008 at 02:16:28PM -0400, Katherine Parra wrote:
> > > > > Dear VMD community:
> > > > > I successfully downloaded one of the versions of python for linux
> > from
> > > > the
> > > > > VMD python library, now everytime I start the python mode in the VMD
> > > > console
> > > > > I get the following error message:
> > > > >
> > > > > 'import site' failed; use -v for traceback
> > > > > ImportError: No module named types or
> > > > > ImportError: No module named numeric_version
> > > > >
> > > > > Besides some other messages like:
> > > > > Could not find Numeric Python version >=22.0
> > > > >
> > > > > Also if I try with:
> > > > > >>> import vmdnumpy, Numeric
> > > > > I get:
> > > > > ImportError: No module named vmdnumpy
> > > > >
> > > > > I think I've been able to change VMD console from tcl mode to python
> > > > mode.
> > > > > But I don't know if these errors could affect any script that I
> > write.
> > > > >
> > > > > Thank you in advance.
> > > > > KP
> > > >
> > > > --
> > > > NIH Resource for Macromolecular Modeling and Bioinformatics
> > > > Beckman Institute for Advanced Science and Technology
> > > > University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
> > > > Email: johns_at_ks.uiuc.edu Phone: 217-244-3349
> > > > WWW: http://www.ks.uiuc.edu/~johns/><
> > http://www.ks.uiuc.edu/%7Ejohns/>
> > > > Fax: 217-244-6078
> > > >
> >
> > --
> > NIH Resource for Macromolecular Modeling and Bioinformatics
> > Beckman Institute for Advanced Science and Technology
> > University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
> > Email: johns_at_ks.uiuc.edu Phone: 217-244-3349
> > WWW: http://www.ks.uiuc.edu/~johns/ <http://www.ks.uiuc.edu/%7Ejohns/>
> > Fax: 217-244-6078
> > 

-- 
NIH Resource for Macromolecular Modeling and Bioinformatics
Beckman Institute for Advanced Science and Technology
University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
Email: johns_at_ks.uiuc.edu                 Phone: 217-244-3349
  WWW: http://www.ks.uiuc.edu/~johns/      Fax: 217-244-6078