VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Mon May 10 2021 - 11:25:30 CDT

Another question I would ask here, since files were moved from one machine
to another, is whether both machines are running identical versions of
VMD+QwikMD or not?

Best,
  John

On Mon, May 10, 2021 at 10:48:21AM -0500, Mariano Spivak wrote:
> Ahmad,
> In this error, it looks like QwikMD is not recognizing the variable
> "plotwindow", which is something internal and as such this most likely has
> nothing to do with the files you created.
> Just in case could you send me a minimal set of files to reproduce the
> error?
> Also, which version of VMD are you running? Which operating system are you
> using?
> Best
>
> On May 10, 2021, at 3:12 AM, Ahmad Alqaisi <[1]aalqais2_at_asu.edu> wrote:
> Hello,
> I'm trying to move QwikMD Files which were created in another PC into my
> laptop and analyze them. I load the .qwikmd file and everything is ok.
> But when trying to use the analysis tools in QwikMD plugin, I get this
> error message:
> bad window path name ".menubar"
> bad window path name ".menubar"
> while executing
> "menubutton $plotwindow.menubar.clear -text "Clear" -underline 0 -menu
> $plotwindow.menubar.clear.menu"
> (procedure "QWIKMD::addplot" line 39)
> invoked from within
> "QWIKMD::addplot rmsf "RMSF Plot" "RMSF vs Residue Number" "Residue
> Number" "RMSF (A)""
> (procedure "QWIKMD::RMSFCalc" line 3)
> invoked from within
> "QWIKMD::RMSFCalc"
> ("RMSF" arm line 2)
> invoked from within
> "switch $QWIKMD::advGui(analyze,advance,calcombo) {
>
> "H Bonds" {
> QWIKMD::callhbondsCalcProc
> }
> "SMD Forces"..."
> (procedure "QWIKMD::CalcAdvcAnalyze" line 27)
> invoked from within
> "QWIKMD::CalcAdvcAnalyze"
> invoked from within
> ".qwikmd.nbinput.f4.fp.general.header.cmbbutt.calculate invoke "
> invoked from within
> ".qwikmd.nbinput.f4.fp.general.header.cmbbutt.calculate instate {pressed
> !disabled} { .qwikmd.nbinput.f4.fp.general.header.cmbbutt.calculate
> state !pre..."
> (command bound to event)
> From my understanding, when moving QwikMD files I change the directory
> in .infoMD file to make it work.
> What do I need to do in order to resolve this issue?
> Best,
> Ahmad Alqaisi
> On Sat, May 8, 2021, 7:06 PM Ahmad Alqaisi <[2]aalqais2_at_asu.edu> wrote:
>
> Hello,
> I'm trying to move QwikMD Files which were created in another PC into
> my laptop and analyze them. I load the .qwikmd file and everything is
> ok.
> But when trying to use the analysis tools in QwikMD plugin, I get this
> error message:
> bad window path name ".menubar"
> bad window path name ".menubar"
> while executing
> "menubutton $plotwindow.menubar.clear -text "Clear" -underline 0
> -menu $plotwindow.menubar.clear.menu"
> (procedure "QWIKMD::addplot" line 39)
> invoked from within
> "QWIKMD::addplot rmsf "RMSF Plot" "RMSF vs Residue Number" "Residue
> Number" "RMSF (A)""
> (procedure "QWIKMD::RMSFCalc" line 3)
> invoked from within
> "QWIKMD::RMSFCalc"
> ("RMSF" arm line 2)
> invoked from within
> "switch $QWIKMD::advGui(analyze,advance,calcombo) {
>
> "H Bonds" {
> QWIKMD::callhbondsCalcProc
> }
> "SMD Forces"..."
> (procedure "QWIKMD::CalcAdvcAnalyze" line 27)
> invoked from within
> "QWIKMD::CalcAdvcAnalyze"
> invoked from within
> ".qwikmd.nbinput.f4.fp.general.header.cmbbutt.calculate invoke "
> invoked from within
> ".qwikmd.nbinput.f4.fp.general.header.cmbbutt.calculate instate
> {pressed !disabled} {
> .qwikmd.nbinput.f4.fp.general.header.cmbbutt.calculate state !pre..."
> (command bound to event)
> From my understanding, when moving QwikMD files I change the directory
> in .infoMD file to make it work.
> What do I need to do in order to resolve this issue?
> Best,
> Ahmad Alqaisi
>
> References
>
> Visible links
> 1. mailto:aalqais2_at_asu.edu
> 2. mailto:aalqais2_at_asu.edu 

-- 
NIH Center for Macromolecular Modeling and Bioinformatics
Beckman Institute for Advanced Science and Technology
University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
http://www.ks.uiuc.edu/~johns/           Phone: 217-244-3349
http://www.ks.uiuc.edu/Research/vmd/