VMD-L Mailing List

From: Albert (mailmd2011_at_gmail.com)
Date: Tue Jan 29 2013 - 04:02:00 CST

Here is more informations:

ls compile/lib_LINUXAMD64

as we can see, the psfgen and other library are missed in this
directory......

probably that's the reasons.....

best
Albert

On 01/29/2013 10:30 AM, Axel Kohlmeyer wrote:
> On Tue, Jan 29, 2013 at 10:25 AM, Albert <mailmd2011_at_gmail.com> wrote:
>> On 01/29/2013 09:32 AM, Axel Kohlmeyer wrote:
>>
>> manually?? that would be a mistake. there is a "distrib" target in the
>> plugin makefile.
>> e.g. you would do something like this. to *properly*
>> make ARCH=LINUXAMD64 PLUGINDIR=${HOME}/compile/vmd/vmd/plugins distrib
>>
>> once the plugins are properly added to the main VMD build tree, make
>> install will take care of installing them properly, too.
>>
>> axel.
>>
>>
>> Hello Axel:
>>
>> thanks for such helpful comments.
>>
>> I recompiled my VMD again following your advices.
>>
>> cd source/plugins
>> make
>> make ARCH=LINUXAMD64 PLUGINDIR=/soft/vmd/plugins distrib
> NOOOO!!!
>
> PLUGINDIR has to be the directory in the VMD *build* tree.
>
>> cd /soft/vmd
>>
>> ./configure LINUXAMD64 OPENGL FLTK TK CUDA IMD LIBSBALL XINERAMA XINPUT
>> LIBTACHYON VRPN NETCDF TCL PYTHON PTHREADS NUMPY SILENT
>> cd src
>> make veryclean
>> make
>>
>> No resource compiler required on this platform.
>>
>> make install
>>
>> Make sure /soft/vmd-1.9.1/bin/vmd is in your path.
>> VMD installation complete. Enjoy!
>>
>>
>> When above all done, I try to run vmd:
>>
>> /soft/vmd-1.9.1/bin/vmd
>>
>>
>> The irspecgui package could not be loaded:
>> The multiseq package could not be loaded:
>> The pmepot_gui package could not be loaded:
>> The autoionizegui package could not be loaded:
>> The solvate package could not be loaded:
>> The autopsf package could not be loaded:
>> The cggui package could not be loaded:
>> The dowser_gui package could not be loaded:
>> The chirality_gui package could not be loaded:
>> The cispeptide_gui package could not be loaded:
>> The forcefieldtoolkit package could not be loaded:
>> The membrane package could not be loaded:
>> The mergestructs package could not be loaded:
>> The molefacture package could not be loaded:
>> The mutator package could not be loaded:
>> The paratool package could not be loaded:
>> The autoimd package could not be loaded:
>>
>> It seems that the problem is still there.... I don't understand why...
> simple. because you didn't follow the instructions correctly.
>
> axel.
>
>
>> thank you very much
>> best
>> Albert
>>
>
>
> --
> Dr. Axel Kohlmeyer akohlmey_at_gmail.com http://goo.gl/1wk0
> International Centre for Theoretical Physics, Trieste. Italy.