VMD-L Mailing List

From: ÖÜÎIJý (wenchangyu2006_at_gmail.com)
Date: Tue Jan 20 2009 - 08:58:31 CST

Thanks,John.
I think I chosed the right version, 32-bit plugin for 32-bit VMD or 64-bit
plugin for 64-bit VMD. But anyway I am looking forward to the test version
of VMD 1.8.7 that includes the Desmond plugins.

Best,
Wenchang

2009/1/20 John Stone <johns_at_ks.uiuc.edu>

>
> Hi,
> I'm expecting that the Desmond plugins will be incorporated
> into the VMD plugin tree soon, based on some recent emails I've
> had with our friends at D.E. Shaw. If this goes as planned, we'll
> be able to provide the Desmond plugins with VMD by default, so you won't
> typically have to compile from source code anymore.
>
> That said, the particular problem that you're having sounds like you've
> loaded a 64-bit build of the plugin into a 32-bit VMD installation, which
> is why you're getting the "wrong ELF class" warnings. You need to use a
> matching plugin build (i.e. 32-bit plugin for 32-bit VMD, 64-bit plugin for
> 64-bit VMD).
>
> Once there's a test build of VMD 1.8.7 available that includes the
> Desmond plugins, I will let people know.
>
> Cheers,
> John Stone
> vmd_at_ks.uiuc.edu
>
> On Tue, Jan 20, 2009 at 10:23:13PM +0800, ?????? wrote:
> > Dear all,
> > Are there anyone using Desmond? Desmond provides a plugin that can be
> used
> > to view trajectories produced by Desmond in VMD. I followed the
> instructions
> > and copied the two *.so files into
> > "install-library-dir/vmd/plugins/LINUX/molfile". But when I tried to run
> > VMD,some err messages from VMD console:
> > Unable to open dynamics library
> > 'install-library-dir/vmd/plugins/LINUX/molfile/maeff_reader.so'
> > 'install-library-dir/vmd/plugins/LINUX/molfile/maeff_reader.so' wrong ELF
> > class: ELFCLASS64
> >
> > Does anybody has the same problem and any suggestions ? Thanks.
> >
> > Best,
> > Wenchang
>
> --
> NIH Resource for Macromolecular Modeling and Bioinformatics
> Beckman Institute for Advanced Science and Technology
> University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
> Email: johns_at_ks.uiuc.edu Phone: 217-244-3349
> WWW: http://www.ks.uiuc.edu/~johns/ Fax: 217-244-6078
>