VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Thu Oct 12 2006 - 15:28:12 CDT

Hi Ran,
  Which platform are you running VMD on? That's a key issue as far as
Python support/usage goes. I can tell you more once I know which platform
you're running on.

  John Stone
  vmd_at_ks.uiuc.edu

On Thu, Oct 12, 2006 at 03:23:42PM +0200, Ran Friedman wrote:
> Dear VMD users/developers,
>
> I've followed quite a few previous posts on IED on the list but none
> seemed to work. I've tried to run IED on VMD 1.8.4. I have Numeric
> Python version 24.2. When trying to run IED I get the following error:
> -------------------------------------------------------------------------------------------------------
> vmd > gopython /usr/local/src/ied-2.02/ied.py
> Info) Starting Python...
> Could not find platform independent libraries <prefix>
> Could not find platform dependent libraries <exec_prefix>
> Consider setting $PYTHONHOME to <prefix>[:<exec_prefix>]
> 'import site' failed; use -v for traceback
> Could not find Numeric Python version >= 22.0
> ImportError: No module named numeric_version
> Info) Text interpreter now Python
> Traceback (most recent call last):
> File "VMD", line 19, in ?
> ImportError: No module named vmdnumpy
> Info) Text interpreter now Tcl
> Traceback (most recent call last):
> File "<string>", line 1, in ?
> File "/usr/local/lib/vmd/scripts/python/Tkinter.py", line 62, in ?
> from types import *
> ImportError: No module named types
> -------------------------------------------------------------------------------------------------------
>
> Any suggestions?
>
> Thanks,
> Ran
>
> --
> ------------------------------------------------------
> Ran Friedman
> Postdoctoral Fellow
> Computational Structural Biology Group (A. Caflisch)
> Department of Biochemistry
> University of Zurich
> Winterthurerstrasse 190
> CH-8057 Zurich, Switzerland
> Tel. +41-44-6355593
> Email: r.friedman_at_bioc.unizh.ch
> Skype: ran.friedman
> ------------------------------------------------------ 

-- 
NIH Resource for Macromolecular Modeling and Bioinformatics
Beckman Institute for Advanced Science and Technology
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