VMD-L Mailing List
From: Axel Kohlmeyer (akohlmey_at_vitae.cmm.upenn.edu)
Date: Mon Feb 20 2006 - 19:13:49 CST
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On Sun, 19 Feb 2006, Younes Ansari wrote:
YA> dear Sir:
YA> I am trying to define the Hg atom in the .vmdrc using:
YA>
YA> set sel [atomselect top "name HG'']
YA> $sel set radius 1.9
YA>
YA> but no changes appears while I am trying to see the difference between Hg
YA> and H atom(VDW).
YA>
YA> Would you please tell me what exactly to do?
it does not work like this. whatever you put in .vmdrc will be only
executed one during the initial startup of VMD. you need to hook into
the process of loading a molecule, for example by tracing
vmd_initialize_structure. for an example, see:
http://www.theochem.ruhr-uni-bochum.de/~axel.kohlmeyer/cpmd-vmd/part7.html#chap9_sect3
regards,
axel.
YA>
YA>
YA> THANKS................
YA>
-- ======================================================================= Axel Kohlmeyer akohlmey_at_cmm.chem.upenn.edu http://www.cmm.upenn.edu Center for Molecular Modeling -- University of Pennsylvania Department of Chemistry, 231 S.34th Street, Philadelphia, PA 19104-6323 tel: 1-215-898-1582, fax: 1-215-573-6233, office-tel: 1-215-898-5425 ======================================================================= If you make something idiot-proof, the universe creates a better idiot.
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