VMD-L Mailing List

From: gtg991m_at_mail.gatech.edu
Date: Fri Apr 01 2005 - 11:17:21 CST

Hello!

I have 20 different RNA coordinate pdb files. I want to select some residues in
each files. For example,
1.pdb => resi 10-14
2.pdb => resi 120-124
3.pdb => resi 220-224
...
Then do the superimposition of all 20 RNA backbones within selections as above
described to get the "average" model and then calculate RMSD between this model
and each RNA.

How to do that in VMD?

Many thanks,

Chiao 

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