VMD-L Mailing List

From: tatyanasysoeva_at_gmail.com
Date: Tue Oct 12 2021 - 19:48:30 CDT

On Tue, Oct 12, 2021 at 6:43 PM vmd-l digest <owner-vmd-l-digest_at_ks.uiuc.edu>
wrote:

>
> vmd-l digest Tuesday, October 12 2021 Volume 01 : Number 4449
>
>
>
> In this issue:
>
> vmd-l: Change Tkconsole brackground
> vmd-l: Generating silanol group on silica
>
> ----------------------------------------------------------------------
>
> Date: Sun, 10 Oct 2021 14:19:12 -0500
> From: Georcki Ropon <groponp_at_gmail.com>
> Subject: vmd-l: Change Tkconsole brackground
>
> Dear users,
>
> I’ve installed VMD into macOS Catalina and tkconsole have black background
> and want change to white background.
>
> Please, can anybody help me into it.
>
>
> Best,
>
> Geo.
>
> ------------------------------
>
> Date: Tue, 12 Oct 2021 16:40:44 -0700
> From: Javier Ivan Wong Romero <jwong_at_cicese.edu.mx>
> Subject: vmd-l: Generating silanol group on silica
>
> - --0000000000006b30e305ce30604e
> Content-Type: text/plain; charset="UTF-8"
>
> Hello
> I have a silica structure generated from the Inorganic Builder plugin. Due
> to the nature of my simulation I need to add protons to the surface oxygens
> to complete the silanol groups. I was wondering if anyone has done anything
> similar or has a script, program or plugin that can help me with this.
> Molefacture does not load because of the size of my silanol structure.
>
> Thank you for your time
>
> - --0000000000006b30e305ce30604e
> Content-Type: text/html; charset="UTF-8"
> Content-Transfer-Encoding: quoted-printable
>
> <div dir=3D"ltr"><div>Hello</div><div>I have a silica structure generated
> f=
> rom the Inorganic Builder plugin. Due to the nature of my simulation I
> need=
> to add protons to the surface oxygens to complete the silanol groups. I
> wa=
> s wondering if anyone has done anything similar or has a script, program
> or=
> plugin that can help me with this. Molefacture does not load because of
> th=
> e size of my silanol structure.</div><div><br></div><div>Thank you for
> your=
> time<br></div><div><br></div></div>
>
> - --0000000000006b30e305ce30604e--
>
> ------------------------------
>
> End of vmd-l digest V1 #4449
> ****************************
>
>