VMD-L Mailing List

From: Maxim Belkin (mbelkin_at_ks.uiuc.edu)
Date: Mon Sep 22 2014 - 13:04:37 CDT

Aref, what are the names of the files you are trying to merge?

Maxim

On Sep 22, 2014, at 7:55 AM, Aref Takiden <aref.takiden_at_mailbox.tu-berlin.de> wrote:

> Hi,
>
> I would like to merge several pdb-files into one dcd-like-file, in such away, that at the end, I could see for example the changes in the bond length of the different snapshots(pdb-files) as a graph in the label-window of vmd.
>
> I tried the script animatepdbs.tcl (link: http://www.ks.uiuc.edu/Research/vmd/script_library/scripts/animatepdbs/animatepdbs.tcl), but it loaded only the first file in spit of that it read the names of the other files. I tested that by adding the command “puts $filename” at the end of the for-loop.
> So in other words I had only one frame in my main window of vmd.
>
> I am thankful for any help.
>
> Best regards,
>
> --
> M. Sc. Aref Takiden
> Technical University of Berlin
> Institute of Chemistry
> AG Mroginski
> Straße des 17. Juni 135
> D-10623 Berlin
>
>
>
>
>
>