From: Peter Freddolino (
Date: Tue Nov 30 2010 - 19:25:50 CST

This appears to be one of the fragments that were inadvertently left out
of the 1.8.7 release. It should work in the 1.8.8 alphas, or you can
unzip the attached file and put it in the
plugins/noarch/tcl/molefacture1.1/lib/fragments subdirectory of your vmd

On 11/29/2010 05:08 PM, Irene Newhouse wrote:
> I just tried to use molefacture to add a phosphate group to a molecule &
> discovered there's no fragment files for phosphate in any of my
> libraries. I'm running VMD 1.8.7, which, according to the website is the
> latest version. Do the fragment files exist somewhere? There's a button
> in molefacture labeled 'phospho' but it doesn't work, due to these
> missing files.
> Thanks!
> Irene Newhouse