VMD-L Mailing List

From: J. Rui Rodrigues (joaquim.rodrigues_at_estg.ipleiria.pt)
Date: Wed Nov 11 2009 - 11:57:37 CST

Sorry,

I mean
...in terminal,I cd to /Users/jrui/today, *start VMD from command line*, load some data with mol new, then
Extensions->Analysis->Timeline, do calculation...

Rui

On Wed, 11 Nov 2009 11:13:36 -0600, John Stone wrote
> Rui,
> If you're referring to loading a saved state, it would just
> be an issue of the filenames that were recorded in the saved state
> file. You can edit a VMD saved state file to make the filenames
> use relative paths, or you can do the opposite and use fully qualified
> paths for the files. The VMD saved state is nothing more than a Tcl
> script, so you can edit as much as you like.
> Let us know if you need more help with this.
>
> Cheers,
> John Stone
> johns_at_ks.uiuc.edu
>
> On Wed, Nov 11, 2009 at 04:54:01PM 0000, J. Rui Rodrigues wrote:
> > Dear all,
> >
> > While some graphical commands/extensions of VMD take the current working directory for reading/writing
files,
> > others remember the last directory used in some previous session. Is there a way to force vmd to forget the
working
> > directory from a previous session and always use the current one? Where is that information stored anyway?
> > I'm using VMD 1.8.7 on an Intel Mac 10.5.8.
> >
> > Thanks,
> > Rui Rodrigues
>
> --
> NIH Resource for Macromolecular Modeling and Bioinformatics
> Beckman Institute for Advanced Science and Technology
> University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
> Email: johns_at_ks.uiuc.edu Phone: 217-244-3349
> WWW: http://www.ks.uiuc.edu/~johns/ Fax: 217-244-6078 

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