VMD-L Mailing List

From: stephane acoca (stephane.acoca_at_mail.mcgill.ca)
Date: Fri Oct 23 2009 - 18:07:02 CDT

Dear all,
I am trying to load an AMBER trajectory into VMD as separate frames in order
to subsequently use the MultiSeq plugin to find the minimal set of frames
that are representative of the trajectory. Is there a way to load a
trajectory as individual files in the MultiSeq plugin or to evaluate all the
frames of a trajectory in the plugin? Otherwise, how do I load teh
trajectory frames individually in VMD so that multiseq views them as
individual protein structures and does its calculations on them.

Many thanks,

Stephane