- c -
- c
: CudaComputeNonbondedMsg
, ComputeMsmMgr
, ComputeNonbondedMIC::compute_record
, CrosstermValue
, ComputeNonbondedCUDA::compute_record
, Rebalancer::pcpair
, CudaCrosstermValue
- c0
: ComputeNonbondedUtil
- c1
: ComputeNonbondedUtil
- C12_f
: ComputeNonbondedUtil
- c12pair
: GroLJPair
- c3
: ComputeNonbondedUtil
- c5
: ComputeNonbondedUtil
- c6
: ComputeNonbondedUtil
- C6_f
: ComputeNonbondedUtil
- c6pair
: GroLJPair
- c7
: ComputeNonbondedUtil
- c8
: ComputeNonbondedUtil
- c_dim
: TopoManagerWrapper
- c_mod
: TopoManagerWrapper
- c_rot
: TopoManagerWrapper
- c_total
: nodesort
- calcFullPair
: ComputeNonbondedUtil
- calcFullPairEnergy
: ComputeNonbondedUtil
- calcFullSelf
: ComputeNonbondedUtil
- calcFullSelfEnergy
: ComputeNonbondedUtil
- calcMergePair
: ComputeNonbondedUtil
- calcMergePairEnergy
: ComputeNonbondedUtil
- calcMergeSelf
: ComputeNonbondedUtil
- calcMergeSelfEnergy
: ComputeNonbondedUtil
- calcPair
: ComputeNonbondedUtil
- calcPairEnergy
: ComputeNonbondedUtil
- calcSelf
: ComputeNonbondedUtil
- calcSelfEnergy
: ComputeNonbondedUtil
- calcSlowPair
: ComputeNonbondedUtil
- calcSlowPairEnergy
: ComputeNonbondedUtil
- calcSlowSelf
: ComputeNonbondedUtil
- calcSlowSelfEnergy
: ComputeNonbondedUtil
- CapInfo
: AmberParm7Reader::Ambertoppar
- CapInfo2
: AmberParm7Reader::Ambertoppar
- cellBasisVector1
: SimParameters
- cellBasisVector2
: SimParameters
- cellBasisVector3
: SimParameters
- cellcenter
: NL_Msm_t
- cellcenter_f
: NL_Msm_t
- cellOrigin
: SimParameters
- cellvec1
: NL_Msm_t
- cellvec1_f
: NL_Msm_t
- cellvec2
: NL_Msm_t
- cellvec2_f
: NL_Msm_t
- cellvec3
: NL_Msm_t
- cellvec3_f
: NL_Msm_t
- center
: GridforceFullBaseGrid
, GridforceLiteGrid
- cg
: EwaldParticle
, PmeParticle
- charge
: QMGrpCalcMsg
, QMForce
, gather_t< T, order >
, msm::AtomCoord
, CompAtom
, atom_constants
, ComputeExtAtom
, ComputeFmmSerialAtom
, ComputeGBISAtom
, ComputeMsmSerialAtom
, ComputeQMAtom
, ComputeQMPntChrg
, QMAtomData
- chargeGridSubmittedCount
: ComputePmeMgr
- chargeIdx
: BasicAtomInfo
, OutputAtomRecord::shortVals
- Charges
: parm
, AmberParm7Reader::Ambertoppar
- charges_time
: ComputePmeMgr
- check_charges_count
: ComputePmeMgr
- check_forces_count
: ComputePmeMgr
- checkpoint
: CheckpointMsg
- checkpoint_berendsenPressure_count
: Sequencer
- checkpoint_lattice
: Controller
- checkpoint_state
: Controller
- checkpoint_stored
: Controller
- checkpoint_task
: Controller
, HomePatch
- checkpoints
: Controller
, HomePatch
- checksize
: GridforceFullBaseGrid
, GridforceLiteGrid
- checksum
: StreamMessage
- child
: Patch
- cid
: Compute
, GBISParamStruct
, CudaComputeNonbonded::ComputeRecord
, SplitComputesMsg
- clients
: GlobalMasterIMD
- clusterId
: ClusterElem
, ClusterSizeMsg
, ClusterCoorElem
, ClusterCoorMsg
- CMAPIndex
: AmberParm7Reader::Ambertoppar
- CMAPParameter
: AmberParm7Reader::Ambertoppar
- CMAPResolution
: AmberParm7Reader::Ambertoppar
- CMAPTermCount
: AmberParm7Reader::Ambertoppar
- CMAPTypeCount
: AmberParm7Reader::Ambertoppar
- Cn1
: parm
, AmberParm7Reader::Ambertoppar
- Cn2
: parm
, AmberParm7Reader::Ambertoppar
- Cno
: parm
, AmberParm7Reader::Ambertoppar
- cntRecvs
: msm::PatchData
- cntRecvsCharge
: MsmBlockKernel< Vtype, Mtype >
- cntRecvsPotential
: MsmBlockKernel< Vtype, Mtype >
- cntVirialContrib
: ComputeMsmMgr
- code
: DataMessage
- col
: eABF
- COLDOn
: SimParameters
- COLDRate
: SimParameters
- COLDTemp
: SimParameters
- collection
: Controller
, Sequencer
- collectionMgr
: BOCgroup
- collMsg
: Rebalancer
- columnsize
: ComputeNonbondedUtil
, Parameters
- colvars
: Node
- colvarsOn
: SimParameters
- commOnly
: ComputeNonbondedUtil
, SimParameters
- comMove
: SimParameters
- compAtom
: CudaComputeNonbonded::PatchRecord
- compAtomP
: patchDataStrc
- compute
: NonbondedCUDASkipMsg
, NonbondedMICSkipMsg
, PmeAtomMsg
, PmeForceMsg
, PmeLaunchMsg
, LocalWorkMsg
, FinishWorkMsg
- computeArray
: LdbCoordinator
- computeBgPairHeap
: Rebalancer
- computeBgSelfHeap
: Rebalancer
- computeChecksum
: Controller
- computeCUDAMgr
: BOCgroup
- computeExtMgr
: BOCgroup
- computeFmmSerialMgr
: BOCgroup
- computeGBISserMgr
: BOCgroup
- computeGlobalObject
: ComputeMgr
- computeGlobalResultsMsgMasterSeq
: ComputeMgr
- computeGlobalResultsMsgs
: ComputeMgr
- computeGlobalResultsMsgSeq
: ComputeMgr
- computeLoad
: processorInfo
- computeMap
: LdbCoordinator
, Node
- computeMapFilename
: SimParameters
- computeMgr
: BOCgroup
, Node
- computeMsmMgr
: BOCgroup
- computeMsmMsaMgr
: BOCgroup
- computeMsmSerialMgr
: BOCgroup
- computePairHeap
: Rebalancer
- computePmeCUDAMgr
: BOCgroup
- ComputePmeCUDAMgr_SDAG_CODE
: ComputePmeCUDAMgr
- computePmeMgr
: BOCgroup
- computeQMMgr
: BOCgroup
- computeRecords
: ComputeNonbondedCUDA
, ComputeNonbondedMIC
- computes
: Rebalancer
- computesChanged
: ComputeNonbondedCUDA
, ComputeNonbondedMIC
- computeSelfHeap
: Rebalancer
- computeSet
: processorInfo
- computesSortedByPriority
: Patch
- computeType
: Compute
- config
: GlobalMasterEasy
- configLines
: QMGrpCalcMsg
- configList
: Node
- consForce
: Molecule
- consForceFile
: SimParameters
- consForceIndexes
: Molecule
- consForceOn
: SimParameters
- consForceScaling
: SimParameters
- constants
: QMGrpCalcMsg
- consTorqueAxisFile
: SimParameters
- consTorqueFile
: SimParameters
- consTorqueGlobVal
: SimParameters
- consTorqueIndexes
: Molecule
- consTorqueOn
: SimParameters
- consTorqueParams
: Molecule
- consTorquePivotFile
: SimParameters
- consTorqueValFile
: SimParameters
- constraintExp
: SimParameters
- constraintScaling
: SimParameters
- constraintsOn
: SimParameters
- constrXOn
: SimParameters
- constrYOn
: SimParameters
- constrZOn
: SimParameters
- cont
: GridforceFullBaseGrid
- controllerExpected
: LdbCoordinator
- controllerReported
: LdbCoordinator
- controllerThread
: LdbCoordinator
- controlNumDegFreedom
: Controller
- controlPressure
: Controller
- controlPressure_nbond
: Controller
- controlPressure_normal
: Controller
- controlPressure_slow
: Controller
- cookie
: MsmC1HermiteGridCutoff
, MsmGridCutoff
- coord
: QMPntChrgMsg
, MsmSerialCoordMsg
, QMCoordMsg
, FmmSerialCoordMsg
, ExtCoordMsg
, msm::PatchData
, MoveAtomMsg
, GBISCoordMsg
- coords
: Node
- coordtmp
: GlobalMasterIMD
- coordtmpsize
: GlobalMasterIMD
- core
: ReplicaDcdAckMsg
, ReplicaDcdDataMsg
, DataMessage
, ReplicaDcdInitMsg
- corr_table
: ComputeNonbondedUtil
- cosAngles
: SimParameters
- coulEnergy
: GBISForceMsg
- coulomb_radius_offset
: SimParameters
- count
: ComputeGlobalDataMsg
, PmeSharedTransMsg
, PmeSharedUntransMsg
- countall
: eABF1D
- counter
: TaggedMsg
- county
: eABF1D
- cpuloads
: LocalLBInfoMsg
- crossterm_array
: Parameters
- crossterm_type
: crossterm
- crosstermCnt
: AtomSignature
- crosstermSigIndices
: AtomSigInfo
- crosstermSigs
: AtomSignature
- cuda_atoms_alloc
: ComputePmeMgr
- cuda_atoms_count
: ComputePmeMgr
- cuda_busy
: ComputePmeMgr
- cuda_lock
: ComputePmeMgr
- cuda_submit_charges_deque
: ComputePmeMgr
- cudaAtomList
: ProxyDataMsg
- cudaAtomPtr
: Patch
- cumAlchWork
: Controller
- curMFlopStep
: Node
- curTimeStep
: Node
- Cutcap
: parm
- cutoff
: GBISParamStruct
, SimParameters
, ComputeNonbondedUtil
, QMGrpCalcMsg
, go_val
- cutoff2
: ComputeNonbondedUtil
- cutoff2_f
: ComputeNonbondedUtil
- cutoff_3
: ComputeNonbondedUtil
- cutoff_3_f
: ComputeNonbondedUtil
- cutoff_6
: ComputeNonbondedUtil
- cutoff_6_f
: ComputeNonbondedUtil
- cylindricalBCAxis
: SimParameters
- cylindricalBCexp1
: SimParameters
- cylindricalBCexp2
: SimParameters
- cylindricalBCk1
: SimParameters
- cylindricalBCk2
: SimParameters
- cylindricalBCl1
: SimParameters
- cylindricalBCl2
: SimParameters
- cylindricalBCOn
: SimParameters
- cylindricalBCr1
: SimParameters
- cylindricalBCr2
: SimParameters
- cylindricalCenter
: SimParameters