Class Index

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_	CudaPmeTranspose	NodeReduction
	CudaPmeXInitMsg	nodesort
__sort_entry	CudaPmeXYInitMsg	nonbonded
a	CudaPmeXYZInitMsg	NonbondedExclValue
	CudaRattleElem	notZero
ABoundAngleRestraint	CudaRattleParam	NumDevicesMsg
ABoundDiheRestraint	CudaStaticAssert	o
ABoundDistRestraint	CudaStaticAssert< true >
ABoundPosRestraint	cudaTensor	ObjectArena
ADiheRestraint	CudaThole	ofstream_namd
ADistRestraint	CudaTholeStage	OneFourNbThole
AFixedAngleRestraint	CudaTileListKernel	OneFourNbTholeElem
AFixedDiheRestraint	cudaVector	Output
AFixedDistRestraint	d	OutputAtomRecord
AFixedPosRestraint		OwnerBox
AForcingAngleRestraint	ParseOptions::DataElement	p
AForcingDiheRestraint	DataExchanger
AForcingDistRestraint	DataMessage	Pairlists
AForcingPosRestraint	datastream	PairTable
AGroup	DataStreamMsg	PAL
ALambdaControl	dcd_params	ParallelIOMgr
ALambdaManager	DeviceBuffer	Parameters
AlchData	DeviceCUDA	ParseOptions
Alg7	DeviceDataMsg	Patch
AlgNbor	dihedral	patch_sortop_curve_a
AlgRecBisection	dihedral_params	patch_sortop_curve_b
AlignVector	DihedralElem	patch_sortop_curve_c
Ambertoppar	DihedralTable	PatchData
Ambertoppar (AmberParm7Reader)	DihedralValue	PatchData (msm)
AnAngleRestraint	DLLoader (dlloader)	PatchDataSOA
angle	DLLoaderInterface (dlloader)	patchDataStrc
angle_params	doublecomplex	PatchDiagram (msm)
AngleElem	drude_constants	PatchElem
AngleTable	dummyData	PatchInfo
AngleValue	e	patchInfo
aniso		PatchLevelPmeData
AnisoElem	eABF	PatchMap
APosRestraint	eABF1D	PatchMapMsg
ARestraint	eABF2D	PatchMgr
ARestraintManager	CudaPmeOneDevice::EnergyVirial	PatchPairRecord
Array (msm)	Entry	PatchProxyListMsg
Array	EntryGlob	ComputeMap::PatchRec
assert_ProxyResultVarsizeMsg	EwaldParticle	CudaComputeNonbonded::PatchRecord
atom_constants	ExchangeAtomsMsg	PatchRecord
atom_name_info	ExchangeAtomsReqMsg	PatchSend (msm)
AtomCoord (msm)	ExclElem	Rebalancer::pcpair
AtomCstInfo	ExclSigInfo	PDB
atomData	Exclusion	PDBAtom
atomID_less	ExclusionCheck	PDBAtomRecord
AtomMap	ExclusionSignature	PDBData
AtomMapper	exlist_sortop	PDBHetatm
AtomNameIdx	ExtCoordMsg	PDBUnknown
AtomsCntPerPatchMsg	ExtForce	pe_sortop_bit_reversed
AtomSigInfo	ExtForceMsg	WorkDistrib::pe_sortop_compact
AtomSignature	f	pe_sortop_coord_x
AtomTable		pe_sortop_coord_y
AVector	FFTCompute	WorkDistrib::pe_sortop_diffuse
b	FileStack	TopoManagerWrapper::pe_sortop_topo
	FinishWorkMsg	per_atom_flags
BackEnd	Flags	pid_sortop_reverse_priority
BasicAtomInfo	floatcomplex	PluginIOMgr
BlockDiagram (msm)	OutputAtomRecord::floatVals	PmeAckMsg
BlockIndex (msm)	FloatVector	PmeAtomFiler
BlockSend (msm)	FmmSerialCoordMsg	PmeAtomMsg
BOCgroup	FmmSerialForceMsg	PmeAtomPencilMsg
BOID	FoldFactor (msm)	PmeAtomStorage
bond	FortranData (AmberParm7Reader)	PmeBlockMsg
bond_params	FortranFormatSpecifier (AmberParm7Reader)	PmeDoneMsg
ComputeBondedCUDAKernel::BondedVirial	four_body_consts	PmeEvirMsg
BondElem	FullAtom	PmeForceMsg
BondTable	g	PmeForcePencilMsg
BondValue		PmeGrid
BoundingBox	GBISCoordMsg	PmeGridMsg
Box	GBISForceMsg	PmeKSpace
BroadcastClient	GBISParamStruct	PmeKSpaceCompute
BroadcastClientElem	GenericAngle	PmeLaunchMsg
BroadcastMgr	GenericAtom	PmeParticle
BroadcastMsg	GenericBond	PmePencil
c	GenericDihedral	PmePencilInitMsg
	GenericMol	PmePencilInitMsgData
C1Matrix	GlobalGPUMgr	PmePencilMap
C1Vector	GlobalMaster	PmePencilX
Controller::checkpoint	GlobalMasterEasy	PmePencilXMap
HomePatch::checkpoint_t	GlobalMasterFreeEnergy	PmePencilXY
CheckpointAtomsMsg	GlobalMasterIMD	PmePencilXYMap
CheckpointAtomsReqMsg	GlobalMasterMisc	PmePencilXYZ
CheckpointMsg	GlobalMasterServer	PmePencilXYZMap
CheckStep	GlobalMasterSMD	PmePencilY
CkPrintf_stringbuf	GlobalMasterSymmetry	PmePencilZ
ClusterCoorElem	GlobalMasterTcl	PmeRealSpace
ClusterCoorMsg	GlobalMasterTest	PmeRealSpaceCompute
ClusterElem	GlobalMasterTMD	PmeRunMsg
ClusterSizeMsg	GMWakeMsg	PmeSharedTransMsg
CollectionMaster	go_pair	PmeSharedUntransMsg
CollectionMgr	go_val	PmeStartMsg
CollectLoadsMsg	Grid (msm)	PmeTransMsg
CollectProxyVectorInstance	GridFixed (msm)	PmeTranspose
CollectProxyVectorSequence	GridforceFullBaseGrid	PmeUntransMsg
CollectionMgr::CollectVectorInstance	GridforceFullMainGrid	PmeXPencil
CollectionMaster::CollectVectorInstance	GridforceFullSubGrid	PmeYPencil
CollectionMaster::CollectVectorInstanceDcdSelection	GridforceGrid	PmeZPencil
CollectVectorMsg	GridforceLiteGrid	pntChrgDist
CollectionMgr::CollectVectorSequence	GridforceFullBaseGrid::GridIndices	Pointer
CollectionMaster::CollectVectorSequence	GridMsg	position_index
CollectionMaster::CollectVectorSequenceDcdSelection	GroGaussPair	PressureProfileReduction
CollectVectorVarMsg	GroLJPair	PriorityQueue (msm)
colvarproxy_namd	gromacsPair	processorInfo
Communicate	GromacsPairElem	ProxyCombinedResultMsg
CompAtom	GromacsPairValue	ProxyCombinedResultRawMsg
CompAtomExt	GromacsTopFile	ProxyDataMsg
CompAtomExtCopy	GroupInitMsg	ProxyElem
Compute	GroupRestraintList	ProxyGBISP1ResultMsg
ComputeAngles	GroupRestraintParam	ProxyGBISP2DataMsg
ComputeAniso	h	ProxyGBISP2ResultMsg
ComputeBondedCUDAKernel		ProxyGBISP3DataMsg
ComputeBonds	HashPool	ProxyListInfo
ComputeConsForce	HashPoolAdaptorT	ProxyMgr
ComputeConsForceMsg	HashReal	ProxyNodeAwareSpanningTreeMsg
ComputeConsTorque	HashString	ProxyPatch
ComputeCrossterms	heapIterator	ProxyResultMsg
ComputeCUDAMgr	heapRecord	ProxyResultVarsizeMsg
ComputeCylindricalBC	HomePatch	ProxySpanningTreeMsg
ComputeMap::ComputeData	HomePatchElem	ProxyTree
ComputeDihedrals	HydroBasedMsg	proxyTreeNode
ComputeDPMEDataMsg	HydrogenGroupID	ProxyUsage
ComputeDPMEResultsMsg	i	ProxyUsageKey
ComputeEField		q
ComputeEwald	idIndxStr
ComputeEwaldMsg	ijpair	QMAtomData
ComputeExcls	ijpair_sortop_bit_reversed	QMCoordMsg
ComputeExt	IMDBox	QMForce
ComputeExtAtom	IMDEnergies	QMForceMsg
ComputeExtMgr	IMDheader	QMGrpCalcMsg
ComputeFmmSerial	IMDOutput	QMGrpResMsg
ComputeFmmSerialAtom	IMDSessionInfo	QMPntChrgMsg
ComputeFmmSerialMgr	IMDTime	qmSolvData
ComputeFullDirect	improper	r
ComputeGBISAtom	improper_params
ComputeGBISser	ImproperElem	Random
ComputeGBISserMgr	ImproperValue	HomePatch::RattleList
ComputeGlobal	indexed_nbthole_pair	RattleParam
ComputeGlobalDataMsg	indexed_table_pair	Rebalancer
ComputeGlobalResultsMsg	indexed_vdw_pair	RecBisection
ComputeGridForce	indexed_vdw_pair_accel	RecvDeviceMsg
ComputeGromacsPair	IndexFile	ReductionMgr
ComputeHomePatch	IndexRange (msm)	ReductionRegisterMsg
ComputeHomePatches	InfoRecord	ReductionSet
ComputeHomeTuples	infostream	ReductionSetData
ComputeImpropers	InitDeviceMsg	ReductionSubmitMsg
computeInfo	InitDeviceMsg2	ReductionValue
ComputeLCPO	InputAtom	RefineOnly
ComputeLjPmeSerial	Int2	RefineTorusLB
ComputeLjPmeSerialMgr	Int3	refSelStr
ComputeLonepairsCUDA	OutputAtomRecord::integerVals	RegisterPatchMsg
ComputeMap	InterpParams_t	RegisterProxyMsg
ComputeMapChangeMsg	intpair	ReplicaDcdAckMsg
ComputeMgr	IRSet	ReplicaDcdDataMsg
ComputeMoa	isEmpty	ReplicaDcdInitMsg
ComputeMsm	isWater	RequireReduction
ComputeMsmMgr	Iterator	RequireReductionCharm
ComputeMsmSerial	Ivec (msm)	RequireReductionShared
ComputeMsmSerialAtom	l	ResidueLookupElem
ComputeMsmSerialMgr		ResizeArray
ComputeNonbondedPair	LargeIRSet	ResizeArrayIter
ComputeNonbondedSelf	Lattice	ResizeArrayPrimIter
ComputeNonbondedUtil	LCPOAtom	ResizeArrayRaw
ComputeNonbondedWorkArrays	LCPONeighborList	Results
ComputeOneFourNbThole	LdbCoordinator	RunningAverage
ComputePatch	LdbMigrateMsg	RunWithAffinity
ComputePatchPair	LincsSolver	s
ComputePme	listNode
ComputePmeCUDA	LjPmeCompute	ScriptParamMsg
ComputePmeCUDADevice	LjPmeGrid	ScriptTcl
ComputePmeCUDAMgr	LjPmeKSpace	seg_resid
ComputePmeMgr	LjPmeMgr	Sequencer
ComputePmeUtil	LjPmeRealSpace	SetLatticeMsg
ComputeQM	LjPmeSerialAtom	SettleParameters
ComputeQMAtom	LjPmeSerialCoordMsg	OutputAtomRecord::shortVals
ComputeQMMgr	LjPmeSerialForceMsg	SimParameters
ComputeQMPntChrg	LJTable	SimpleBroadcastObject
CudaComputeNonbonded::ComputeRecord	LocalID	ScriptTcl::SimpleBroadcastObjectWrapper
ComputeRestraints	localIDResult	SlaveInitMsg
ComputeSelfAngles	LocalLBInfoMsg	SortableResizeArray
ComputeSelfAniso	LocalPmeInfo	SortedArray
ComputeSelfBonds	LocalWorkMsg	sortop_base
ComputeSelfCrossterms	ComputeLonepairsCUDA::LonepairBisector	sortop_bit_reversed
ComputeSelfDihedrals	ComputeLonepairsCUDA::LonepairColinear	sortop_SOA
ComputeSelfExcls	ComputeLonepairsCUDA::LonepairRelative	sortop_x
ComputeSelfGromacsPair	lphost	sortop_y
ComputeSelfImpropers	LSSDataStr	sortop_z
ComputeSelfOneFourNbThole	lssDistSort	sparseMatrix
ComputeSelfThole	LSSSubsDat	SplitComputesMsg
ComputeSelfTuples	m	StreamMessage
ComputeSphericalBC		StringList
ComputeStir	main	SubmitReduction
ComputeTclBC	Map (msm)	SubmitReductionCharm
ComputeThole	MathArray	SubmitReductionShared
ConfigList	Matrix4	Sync
ConfigList::ConfigListNode	Matrix4Symmetry	SynchronousCollectives
ConstPointer	Matrix4TMD	SynchronousCollectivesMulticastMsg
constraintTuple	maxHeap	t
Controller	Measure
ControllerBroadcasts	meMMQMGrp	table_pair_params
ControllerState	memusageinit	LJTable::TableEntry
cptr_sortop_priority	MGridforceParams	TaggedMsg
CpuPmeAtomStorage	MGridforceParamsList	Tensor
cr_sortop_distance	MigrateAtomsCombinedMsg	thole
cr_sortop_reverse_priority	MigrateAtomsMsg	TholeElem
crossterm	MigrationInfo	TileExcl
crossterm_params	minHeap	TileList
CrosstermData	minpoint	TileListStat
CrosstermElem	MIStream	TileListVirialEnergy
CrosstermValue	MoaData	TopoManagerWrapper
Controller::CthThreadWrapper	Molecule	TorusLB
cuda_args_t	MolInfoMsg	Transform
ComputePmeMgr::cuda_submit_charges_args	MolInst	TransposeBatch
CudaAlchFlags	MOStream	TupleCounts
CudaAlchLambdas	MoveAllByMsg	TupleData
CudaAlchParameters	MoveAtomMsg	TupleDataStage
CudaAngle	MoveInputAtomsMsg	TupleDataStagePeer
CudaAngleStage	MovePatch	TupleIntArrays
CudaAngleValue	MovePatchAtomsMsg	TupleIntArraysContiguous
CudaAniso	MovePatchesMsg	TupleIntArraysPeer
CudaAnisoStage	MovingAverage	TuplePatchElem
CudaAtom	MsmBlock	TupleSignature
CudaBond	MsmBlockKernel	TupleSizes
CudaBondStage	MsmBlockMap	TupleStrider
CudaBondValue	MsmBlockProxyMsg	TupleString
CudaComputeGBISKernel	MsmC1HermiteBlock	TupleStringHash
CudaComputeNonbonded	MsmC1HermiteBlockProxyMsg	TwoLevelParam
CudaComputeNonbondedKernel	MsmC1HermiteGridCutoff	u
CudaComputeNonbondedMsg	MsmC1HermiteGridCutoffProxyMsg
CudaComputeRecord	MsmC1HermiteGridCutoffSetupMsg	UniqueSet
CudaCrossterm	MsmGridCutoff	UniqueSetIter
CudaCrosstermStage	MsmGridCutoffInitMsg	UniqueSetRaw
CudaCrosstermValue	MsmGridCutoffKernel	UniqueSortedArray
CudaDihedral	MsmGridCutoffMap	UnregisterProxyMsg
CudaDihedralStage	MsmGridCutoffProxyMsg	v
CudaDihedralValue	MsmGridCutoffSetupMsg
CudaExclusion	MsmInitMsg	validRattle
CudaExclusionStage	MsmProfiler	vdw_pair_params
CudaFFTCompute	MsmSerialCoordMsg	vdw_params
CudaForce	MsmSerialForceMsg	vdw_val
CudaGlobalMasterClient (CudaGlobalMaster::CUDAGM_NS)	MsmTimer	VDWTable
CudaGlobalMasterServer	MStringStrider	vect
CudaLocalRecord	MultiString	Vector
CudaMInfo	n	VirialEnergy
CudaNBConstants		vmdforce
CudaNonbondedTables	NamdCentLB	w
CudaOneFourNbThole	NamdDummyLB
CudaOneFourNbTholeStage	NamdHybridLB	wkf_timer
CudaPatchRecord	NamdProfileEvent	wkfmsgtimer
CudaPeerRecord	NamdState	WorkDistrib
CudaPmeAtomStorage	nbthole_pair_params	WorkIndex
CudaPmeKSpaceCompute	nbthole_pair_value	x
CudaPmeOneDevice	netint
CudaPmePencilX	NL_Msm_t	XXH32_canonical_t
CudaPmePencilXY	Node	XXH64_canonical_t
CudaPmePencilXYZ	NodeBroadcast	z
CudaPmePencilY	NodePmeInfo
CudaPmePencilZ	NodePmeMgr	zVector
CudaPmeRealSpaceCompute	NodeProxyMgr

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