NAMD Class Index

A	ComputeSelfAngles	NamdState
ABoundAngleRestraint	ComputeSelfBonds	netint
ABoundDiheRestraint	ComputeSelfCrossterms	Node
ABoundDistRestraint	ComputeSelfDihedrals	nodesort
ABoundPosRestraint	ComputeSelfImpropers	nonbonded
ADiheRestraint	ComputeSelfTuples	NonbondedExclValue
ADistRestraint	ComputeSphericalBC	O
AFixedAngleRestraint	ComputeStir	ObjectArena
AFixedDiheRestraint	ComputeTclBC	Output
AFixedDistRestraint	ConfigList	OwnerBox
AFixedPosRestraint	ConfigList::ConfigListNode	P
AForcingAngleRestraint	Controller	Pairlists
AForcingDiheRestraint	ControllerBroadcasts	PAL
AForcingDistRestraint	crossterm	Parameters
AForcingPosRestraint	crossterm_params	parm
AGroup	CrosstermData	ParseOptions
ALambdaControl	CrosstermElem	ParseOptions::DataElement
ALambdaManager	CrosstermValue	Patch
Alg7	D	PatchElem
AlgNbor	datastream	patchInfo
AlgRecBisection	DataStreamMsg	PatchMap
AlignVector	dihedral	PatchMgr
AllCharmArrsMsg	dihedral_params	PDB
AnAngleRestraint	DihedralElem	PDBAtom
angle	DihedralTable	PDBAtomRecord
angle_params	DihedralValue	PDBData
AngleElem	doublecomplex	PDBHetatm
AngleTable	E	PDBUnknown
AngleValue	EnqueueDataMsg	PmeGrid
APosRestraint	Entry	PmeGridMsg
ARestraint	EntryGlob	PmeKSpace
ARestraintManager	EwaldParticle	PmeParticle
Array	ExclSigInfo	PmePencil
atom_constants	Exclusion	PmePencilInitMsg
atom_name_info	ExclusionCheck	PmePencilInitMsgData
AtomCstInfo	ExclusionSignature	PmeRealSpace
AtomMap	ExtCoordMsg	PmeTransMsg
AtomNameIdx	ExtForce	PmeUntransMsg
AtomsCoorMsg	ExtForceMsg	PmeXPencil
AtomsDisInfo	F	PmeYPencil
AtomsForcesMsg	FileStack	PmeZPencil
AtomSigInfo	Flags	PositionBox
AtomSignature	floatcomplex	PositionOwnerBox
AtomStaticInfoMsg	FloatVector	PressureProfileReduction
AtomTable	four_body_consts	processorInfo
AVector	FullAtom	ProxyAtomsMsg
B	G	ProxyCombinedResultMsg
BackEnd	GenericAngle	ProxyDataMsg
BasicAtomInfo	GenericAtom	ProxyElem
BOCclass	GenericBond	ProxyListElem
BOCgroup	GenericDihedral	ProxyMgr
BOID	GenericMol	ProxyPatch
bond	GlobalMaster	ProxyResultMsg
bond_params	GlobalMasterEasy	ProxyResultVarsizeMsg
BondElem	GlobalMasterFreeEnergy	ProxySpanningTreeMsg
BondTable	GlobalMasterIMD	ProxyTree
BondValue	GlobalMasterMisc	ProxyUsage
Box	GlobalMasterServer	ProxyUsageKey
BroadcastClient	GlobalMasterSMD	R
BroadcastClientElem	GlobalMasterTcl	Random
BroadcastMgr	GlobalMasterTest	Rebalancer
BroadcastMsg	GlobalMasterTMD	Rebalancer::pcpair
C	GridforceGrid	RecBisection
CBase_PmeXPencil	GridforceGrid::box	ReductionMgr
CBase_PmeYPencil	GromacsTopFile	ReductionRegisterMsg
CBase_PmeZPencil	GroupInitMsg	ReductionSet
CollectionMaster	H	ReductionSetData
CollectionMaster::CollectVectorInstance	heapIterator	ReductionSubmitMsg
CollectionMaster::CollectVectorSequence	heapRecord	RefineOnly
CollectionMasterHandler	HomePatch	RefineTorusLB
CollectionMgr	HomePatchElem	RegisterProxyMsg
CollectionMgr::CollectVectorInstance	HydrogenGroupID	RequireReduction
CollectionMgr::CollectVectorSequence	I	ResidueLookupElem
CollectVectorMsg	IMDEnergies	ResizeArray
Communicate	IMDheader	ResizeArrayIter
CompAtom	IMDOutput	ResizeArrayPrimIter
CompAtomExt	improper	ResizeArrayRaw
Compute	improper_params	Results
ComputeAngles	ImproperElem	S
ComputeBonds	ImproperValue	ScriptParamMsg
ComputeConsForce	indexed_vdw_pair	ScriptTcl
ComputeConsForceMsg	InfoRecord	Sequencer
ComputeConsTorque	infostream	Set
ComputeCrossterms	Iterator	SetLatticeMsg
ComputeCylindricalBC	L	SimParameters
ComputeDihedrals	Lattice	SimpleBroadcastObject
ComputeDPMEDataMsg	LdbCoordinator	SlaveInitMsg
ComputeDPMEResultsMsg	LdbMigrateMsg	SortableResizeArray
ComputeEField	listNode	SortedArray
ComputeEwald	LJTable	StreamMessage
ComputeEwaldMsg	LJTable::TableEntry	StringList
ComputeExt	LocalID	SubmitReduction
ComputeExtMgr	LocalPmeInfo	Sync
ComputeFullDirect	LocalWorkMsg	T
ComputeGlobal	M	TaggedMsg
ComputeGlobalConfigMsg	main	Tensor
ComputeGlobalDataMsg	MapDistribMsg	TorusLB
ComputeGlobalResultsMsg	MasterHandlerInitMsg	Transform
ComputeGridForce	MathArray	TuplePatchElem
ComputeHomePatch	Matrix4	TupleSignature
ComputeHomePatches	maxHeap	U
ComputeHomeTuples	memusageinit	UniqueSet
ComputeImpropers	MigrateAtomsCombinedMsg	UniqueSetIter
computeInfo	MigrateAtomsMsg	UniqueSetRaw
ComputeMap	MigrationInfo	UniqueSortedArray
ComputeMap::ComputeData	minHeap	UnregisterProxyMsg
ComputeMap::PatchRec	minpoint	V
ComputeMapChangeMsg	MIStream	vdw_pair_params
ComputeMgr	Molecule	vdw_params
ComputeNonbondedPair	MolInst	vdw_val
ComputeNonbondedSelf	MOStream	VDWTable
ComputeNonbondedUtil	MoveAllByMsg	Vector
ComputeNonbondedWorkArrays	MoveAtomMsg	vmdforce
ComputePatch	MovePatch	W
ComputePatchPair	MovePatchesMsg	WorkDistrib
ComputePme	N	Z
ComputePmeMgr	NamdCentLB	zVector
ComputeRestraints	NamdNborLB

---