Class Index

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_	CudaPmePencilZ	NodePmeMgr
	CudaPmeRealSpaceCompute	NodeProxyMgr
__sort_entry	CudaPmeTranspose	NodeReduction
a	CudaPmeXInitMsg	nodesort
	CudaPmeXYInitMsg	nonbonded
ABoundAngleRestraint	CudaPmeXYZInitMsg	NonbondedExclValue
ABoundDiheRestraint	CudaRattleElem	notZero
ABoundDistRestraint	CudaRattleParam	NumDevicesMsg
ABoundPosRestraint	CudaStaticAssert	o
ADiheRestraint	CudaStaticAssert< true >
ADistRestraint	cudaTensor	ObjectArena
AFixedAngleRestraint	CudaTileListKernel	ofstream_namd
AFixedDiheRestraint	cudaVector	Output
AFixedDistRestraint	d	OutputAtomRecord
AFixedPosRestraint		OwnerBox
AForcingAngleRestraint	ParseOptions::DataElement	p
AForcingDiheRestraint	DataExchanger
AForcingDistRestraint	DataMessage	Pairlists
AForcingPosRestraint	datastream	PairTable
AGroup	DataStreamMsg	PAL
ALambdaControl	dcd_params	ParallelIOMgr
ALambdaManager	DeviceBuffer	Parameters
AlchData	DeviceCUDA	ParseOptions
Alg7	DeviceDataMsg	Patch
AlgNbor	dihedral	patch_sortop_curve_a
AlgRecBisection	dihedral_params	patch_sortop_curve_b
AlignVector	DihedralElem	patch_sortop_curve_c
Ambertoppar	DihedralTable	PatchData (msm)
Ambertoppar (AmberParm7Reader)	DihedralValue	PatchData
AnAngleRestraint	DLLoader (dlloader)	PatchDataSOA
angle	DLLoaderInterface (dlloader)	patchDataStrc
angle_params	doublecomplex	PatchDiagram (msm)
AngleElem	drude_constants	PatchElem
AngleTable	dummyData	patchInfo
AngleValue	e	PatchInfo
aniso		PatchLevelPmeData
AnisoElem	eABF	PatchMap
APosRestraint	eABF1D	PatchMapMsg
ARestraint	eABF2D	PatchMgr
ARestraintManager	CudaPmeOneDevice::EnergyVirial	PatchPairRecord
Array (msm)	Entry	PatchProxyListMsg
Array	EntryGlob	ComputeMap::PatchRec
assert_ProxyResultVarsizeMsg	EwaldParticle	CudaComputeNonbonded::PatchRecord
atom_constants	ExchangeAtomsMsg	PatchRecord
atom_name_info	ExchangeAtomsReqMsg	PatchSend (msm)
AtomCoord (msm)	ExclElem	Rebalancer::pcpair
AtomCstInfo	ExclSigInfo	PDB
atomData	Exclusion	PDBAtom
atomID_less	ExclusionCheck	PDBAtomRecord
AtomMap	ExclusionSignature	PDBData
AtomMapper	exlist_sortop	PDBHetatm
AtomNameIdx	ExtCoordMsg	PDBUnknown
AtomsCntPerPatchMsg	ExtForce	pe_sortop_bit_reversed
AtomSigInfo	ExtForceMsg	WorkDistrib::pe_sortop_compact
AtomSignature	f	pe_sortop_coord_x
AtomTable		pe_sortop_coord_y
AVector	FFTCompute	WorkDistrib::pe_sortop_diffuse
b	FileStack	TopoManagerWrapper::pe_sortop_topo
	FinishWorkMsg	per_atom_flags
BackEnd	Flags	pid_sortop_reverse_priority
BasicAtomInfo	floatcomplex	PluginIOMgr
BlockDiagram (msm)	OutputAtomRecord::floatVals	PmeAckMsg
BlockIndex (msm)	FloatVector	PmeAtomFiler
BlockSend (msm)	FmmSerialCoordMsg	PmeAtomMsg
BOCgroup	FmmSerialForceMsg	PmeAtomPencilMsg
BOID	FoldFactor (msm)	PmeAtomStorage
bond	FortranData (AmberParm7Reader)	PmeBlockMsg
bond_params	FortranFormatSpecifier (AmberParm7Reader)	PmeDoneMsg
ComputeBondedCUDAKernel::BondedVirial	four_body_consts	PmeEvirMsg
BondElem	FullAtom	PmeForceMsg
BondTable	g	PmeForcePencilMsg
BondValue		PmeGrid
BoundingBox	GBISCoordMsg	PmeGridMsg
Box	GBISForceMsg	PmeKSpace
BroadcastClient	GBISParamStruct	PmeKSpaceCompute
BroadcastClientElem	GenericAngle	PmeLaunchMsg
BroadcastMgr	GenericAtom	PmeParticle
BroadcastMsg	GenericBond	PmePencil
c	GenericDihedral	PmePencilInitMsg
	GenericMol	PmePencilInitMsgData
C1Matrix	GlobalMaster	PmePencilMap
C1Vector	GlobalMasterEasy	PmePencilX
Controller::checkpoint	GlobalMasterFreeEnergy	PmePencilXMap
HomePatch::checkpoint_t	GlobalMasterIMD	PmePencilXY
CheckpointAtomsMsg	GlobalMasterMisc	PmePencilXYMap
CheckpointAtomsReqMsg	GlobalMasterServer	PmePencilXYZ
CheckpointMsg	GlobalMasterSMD	PmePencilXYZMap
CheckStep	GlobalMasterSymmetry	PmePencilY
CkPrintf_stringbuf	GlobalMasterTcl	PmePencilZ
ClusterCoorElem	GlobalMasterTest	PmeRealSpace
ClusterCoorMsg	GlobalMasterTMD	PmeRealSpaceCompute
ClusterElem	GMWakeMsg	PmeRunMsg
ClusterSizeMsg	go_pair	PmeSharedTransMsg
CollectionMaster	go_val	PmeSharedUntransMsg
CollectionMgr	Grid (msm)	PmeStartMsg
CollectLoadsMsg	GridFixed (msm)	PmeTransMsg
CollectProxyVectorInstance	GridforceFullBaseGrid	PmeTranspose
CollectProxyVectorSequence	GridforceFullMainGrid	PmeUntransMsg
CollectionMaster::CollectVectorInstance	GridforceFullSubGrid	PmeXPencil
CollectionMgr::CollectVectorInstance	GridforceGrid	PmeYPencil
CollectionMaster::CollectVectorInstanceDcdSelection	GridforceLiteGrid	PmeZPencil
CollectVectorMsg	GridforceFullBaseGrid::GridIndices	pntChrgDist
CollectionMgr::CollectVectorSequence	GridMsg	Pointer
CollectionMaster::CollectVectorSequence	GroGaussPair	position_index
CollectionMaster::CollectVectorSequenceDcdSelection	GroLJPair	PressureProfileReduction
CollectVectorVarMsg	gromacsPair	PriorityQueue (msm)
colvarproxy_namd	GromacsPairElem	processorInfo
Communicate	GromacsPairValue	ProxyCombinedResultMsg
CompAtom	GromacsTopFile	ProxyCombinedResultRawMsg
CompAtomExt	GroupInitMsg	ProxyDataMsg
CompAtomExtCopy	GroupRestraintList	ProxyElem
Compute	GroupRestraintParam	ProxyGBISP1ResultMsg
ComputeAngles	h	ProxyGBISP2DataMsg
ComputeAniso		ProxyGBISP2ResultMsg
ComputeBondedCUDAKernel	HashPool	ProxyGBISP3DataMsg
ComputeBonds	HashPoolAdaptorT	ProxyListInfo
ComputeConsForce	HashReal	ProxyMgr
ComputeConsForceMsg	HashString	ProxyNodeAwareSpanningTreeMsg
ComputeConsTorque	heapIterator	ProxyPatch
ComputeCrossterms	heapRecord	ProxyResultMsg
ComputeCUDAMgr	HomePatch	ProxyResultVarsizeMsg
ComputeCylindricalBC	HomePatchElem	ProxySpanningTreeMsg
ComputeMap::ComputeData	HydroBasedMsg	ProxyTree
ComputeDihedrals	HydrogenGroupID	proxyTreeNode
ComputeDPMEDataMsg	i	ProxyUsage
ComputeDPMEResultsMsg		ProxyUsageKey
ComputeEField	idIndxStr	q
ComputeEwald	ijpair
ComputeEwaldMsg	ijpair_sortop_bit_reversed	QMAtomData
ComputeExcls	IMDEnergies	QMCoordMsg
ComputeExt	IMDheader	QMForce
ComputeExtAtom	IMDOutput	QMForceMsg
ComputeExtMgr	improper	QMGrpCalcMsg
ComputeFmmSerial	improper_params	QMGrpResMsg
ComputeFmmSerialAtom	ImproperElem	QMPntChrgMsg
ComputeFmmSerialMgr	ImproperValue	qmSolvData
ComputeFullDirect	indexed_nbthole_pair	r
ComputeGBISAtom	indexed_table_pair
ComputeGBISser	indexed_vdw_pair	Random
ComputeGBISserMgr	indexed_vdw_pair_accel	HomePatch::RattleList
ComputeGlobal	IndexRange (msm)	RattleParam
ComputeGlobalDataMsg	InfoRecord	Rebalancer
ComputeGlobalResultsMsg	infostream	RecBisection
ComputeGridForce	InitDeviceMsg	RecvDeviceMsg
ComputeGromacsPair	InitDeviceMsg2	ReductionMgr
ComputeHomePatch	InputAtom	ReductionRegisterMsg
ComputeHomePatches	Int2	ReductionSet
ComputeHomeTuples	Int3	ReductionSetData
ComputeImpropers	OutputAtomRecord::integerVals	ReductionSubmitMsg
computeInfo	InterpParams_t	ReductionValue
ComputeLCPO	intpair	RefineOnly
ComputeLjPmeSerial	IRSet	RefineTorusLB
ComputeLjPmeSerialMgr	isEmpty	refSelStr
ComputeLonepairsCUDA	isWater	RegisterPatchMsg
ComputeMap	Iterator	RegisterProxyMsg
ComputeMapChangeMsg	Ivec (msm)	ReplicaDcdAckMsg
ComputeMgr	l	ReplicaDcdDataMsg
ComputeMoa		ReplicaDcdInitMsg
ComputeMsm	LargeIRSet	RequireReduction
ComputeMsmMgr	Lattice	ResidueLookupElem
ComputeMsmSerial	LCPOAtom	ResizeArray
ComputeMsmSerialAtom	LCPONeighborList	ResizeArrayIter
ComputeMsmSerialMgr	LdbCoordinator	ResizeArrayPrimIter
ComputeNonbondedPair	LdbMigrateMsg	ResizeArrayRaw
ComputeNonbondedSelf	LincsSolver	Results
ComputeNonbondedUtil	listNode	RunningAverage
ComputeNonbondedWorkArrays	LjPmeCompute	s
ComputePatch	LjPmeGrid
ComputePatchPair	LjPmeKSpace	ScriptParamMsg
ComputePme	LjPmeMgr	ScriptTcl
ComputePmeCUDA	LjPmeRealSpace	seg_resid
ComputePmeCUDADevice	LjPmeSerialAtom	Sequencer
ComputePmeCUDAMgr	LjPmeSerialCoordMsg	SetLatticeMsg
ComputePmeMgr	LjPmeSerialForceMsg	SettleParameters
ComputePmeUtil	LJTable	OutputAtomRecord::shortVals
ComputeQM	LocalID	SimParameters
ComputeQMAtom	localIDResult	SimpleBroadcastObject
ComputeQMMgr	LocalLBInfoMsg	ScriptTcl::SimpleBroadcastObjectWrapper
ComputeQMPntChrg	LocalPmeInfo	SlaveInitMsg
CudaComputeNonbonded::ComputeRecord	LocalWorkMsg	SortableResizeArray
ComputeRestraints	ComputeLonepairsCUDA::LonepairBisector	SortedArray
ComputeSelfAngles	ComputeLonepairsCUDA::LonepairColinear	sortop_base
ComputeSelfAniso	ComputeLonepairsCUDA::LonepairRelative	sortop_bit_reversed
ComputeSelfBonds	lphost	sortop_SOA
ComputeSelfCrossterms	LSSDataStr	sortop_x
ComputeSelfDihedrals	lssDistSort	sortop_y
ComputeSelfExcls	LSSSubsDat	sortop_z
ComputeSelfGromacsPair	m	sparseMatrix
ComputeSelfImpropers		SplitComputesMsg
ComputeSelfThole	main	StreamMessage
ComputeSelfTuples	Map (msm)	StringList
ComputeSphericalBC	MathArray	SubmitReduction
ComputeStir	Matrix4	Sync
ComputeTclBC	Matrix4Symmetry	t
ComputeThole	Matrix4TMD
ConfigList	maxHeap	table_pair_params
ConfigList::ConfigListNode	Measure	LJTable::TableEntry
ConstPointer	meMMQMGrp	TaggedMsg
constraintTuple	memusageinit	Tensor
Controller	MGridforceParams	thole
ControllerBroadcasts	MGridforceParamsList	TholeElem
ControllerState	MigrateAtomsCombinedMsg	TileExcl
cptr_sortop_priority	MigrateAtomsMsg	TileList
CpuPmeAtomStorage	MigrationInfo	TileListStat
cr_sortop_distance	minHeap	TileListVirialEnergy
cr_sortop_reverse_priority	minpoint	TopoManagerWrapper
crossterm	MIStream	TorusLB
crossterm_params	MoaData	Transform
CrosstermData	Molecule	TransposeBatch
CrosstermElem	MolInfoMsg	TupleCounts
CrosstermValue	MolInst	TupleData
Controller::CthThreadWrapper	MOStream	TupleDataStage
cuda_args_t	MoveAllByMsg	TupleDataStagePeer
ComputePmeMgr::cuda_submit_charges_args	MoveAtomMsg	TupleIntArrays
CudaAlchFlags	MoveInputAtomsMsg	TupleIntArraysContiguous
CudaAlchLambdas	MovePatch	TupleIntArraysPeer
CudaAlchParameters	MovePatchAtomsMsg	TuplePatchElem
CudaAngle	MovePatchesMsg	TupleSignature
CudaAngleStage	MovingAverage	TupleSizes
CudaAngleValue	MsmBlock	TupleStrider
CudaAtom	MsmBlockKernel	TupleString
CudaBond	MsmBlockMap	TupleStringHash
CudaBondStage	MsmBlockProxyMsg	TwoLevelParam
CudaBondValue	MsmC1HermiteBlock	u
CudaComputeGBISKernel	MsmC1HermiteBlockProxyMsg
CudaComputeNonbonded	MsmC1HermiteGridCutoff	UniqueSet
CudaComputeNonbondedKernel	MsmC1HermiteGridCutoffProxyMsg	UniqueSetIter
CudaComputeNonbondedMsg	MsmC1HermiteGridCutoffSetupMsg	UniqueSetRaw
CudaComputeRecord	MsmGridCutoff	UniqueSortedArray
CudaCrossterm	MsmGridCutoffInitMsg	UnregisterProxyMsg
CudaCrosstermStage	MsmGridCutoffKernel	v
CudaCrosstermValue	MsmGridCutoffMap
CudaDihedral	MsmGridCutoffProxyMsg	validRattle
CudaDihedralStage	MsmGridCutoffSetupMsg	vdw_pair_params
CudaDihedralValue	MsmInitMsg	vdw_params
CudaExclusion	MsmProfiler	vdw_val
CudaExclusionStage	MsmSerialCoordMsg	VDWTable
CudaFFTCompute	MsmSerialForceMsg	vect
CudaForce	MsmTimer	Vector
CudaGlobalMasterClient	MStringStrider	VirialEnergy
CudaGlobalMasterServer	MultiString	vmdforce
CudaLocalRecord	n	w
CudaMInfo
CudaNBConstants	NamdCentLB	wkf_timer
CudaNonbondedTables	NamdDummyLB	wkfmsgtimer
CudaPatchRecord	NamdHybridLB	WorkDistrib
CudaPeerRecord	NamdProfileEvent	WorkIndex
CudaPmeAtomStorage	NamdState	x
CudaPmeKSpaceCompute	nbthole_pair_params
CudaPmeOneDevice	nbthole_pair_value	XXH32_canonical_t
CudaPmePencilX	netint	XXH64_canonical_t
CudaPmePencilXY	NL_Msm_t	z
CudaPmePencilXYZ	Node
CudaPmePencilY	NodePmeInfo	zVector

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