NAMD
|
#include <PatchTypes.h>
Public Member Functions | |
Flags () | |
void | copyIntFlags (const Flags &flags) |
Flags & | operator= (const Flags &flags) |
Public Attributes | |
int | step |
int | sequence |
int | doEnergy |
int | doVirial |
int | doNonbonded |
int | doFullElectrostatics |
int | doMolly |
int | doMinimize |
int | doLoweAndersen |
int | doGBIS |
int | doLCPO |
int | submitLoadStats |
int | maxForceUsed |
int | maxForceMerged |
int | usePairlists |
int | savePairlists |
BigReal | pairlistTolerance |
BigReal | maxAtomMovement |
BigReal | maxGroupRadius |
Lattice | lattice |
Copyright (c) 1995, 1996, 1997, 1998, 1999, 2000 by The Board of Trustees of the University of Illinois. All rights reserved.
Definition at line 13 of file PatchTypes.h.
|
inline |
Definition at line 47 of file PatchTypes.h.
|
inline |
Definition at line 72 of file PatchTypes.h.
References doEnergy, doFullElectrostatics, doGBIS, doLCPO, doLoweAndersen, doMinimize, doMolly, doNonbonded, doVirial, lattice, maxForceMerged, maxForceUsed, sequence, step, and submitLoadStats.
Definition at line 95 of file PatchTypes.h.
int Flags::doEnergy |
Definition at line 20 of file PatchTypes.h.
Referenced by ExclElem::computeForce(), copyIntFlags(), ComputeNonbondedPair::doForce(), ComputeNonbondedSelf::doForce(), CudaComputeNonbonded::doWork(), Sequencer::integrate(), Sequencer::integrate_SOA(), and Sequencer::minimize().
int Flags::doFullElectrostatics |
Definition at line 23 of file PatchTypes.h.
Referenced by ProxyPatch::boxClosed(), ExclElem::computeForce(), copyIntFlags(), ComputeNonbondedPair::doForce(), ComputeNonbondedSelf::doForce(), CudaComputeNonbonded::doWork(), Patch::forceBoxClosed(), HomePatch::gbisP3Ready(), Sequencer::integrate(), Sequencer::integrate_SOA(), Sequencer::minimize(), Sequencer::multigratorPressure(), ComputePme::noWork(), Patch::positionsReady(), Sequencer::runComputeObjects(), and Sequencer::runComputeObjects_SOA().
int Flags::doGBIS |
Definition at line 29 of file PatchTypes.h.
Referenced by HomePatch::boxClosed(), copyIntFlags(), ComputeNonbondedPair::doForce(), ComputeNonbondedSelf::doForce(), ComputePatch::doWork(), Sequencer::integrate(), Sequencer::integrate_SOA(), Sequencer::minimize(), ComputeNonbondedSelf::noWork(), Patch::positionsReady(), HomePatch::positionsReady(), HomePatch::positionsReady_SOA(), ProxyPatch::receiveAll(), and Sequencer::runComputeObjects().
int Flags::doLCPO |
Definition at line 30 of file PatchTypes.h.
Referenced by copyIntFlags(), Sequencer::integrate(), Sequencer::integrate_SOA(), Sequencer::minimize(), Patch::positionsReady(), HomePatch::positionsReady(), HomePatch::positionsReady_SOA(), and ProxyPatch::receiveAll().
int Flags::doLoweAndersen |
Definition at line 27 of file PatchTypes.h.
Referenced by copyIntFlags(), ComputeNonbondedPair::doForce(), ComputeNonbondedSelf::doForce(), Sequencer::integrate(), Sequencer::integrate_SOA(), Sequencer::minimize(), ComputeNonbondedSelf::noWork(), Patch::positionsReady(), HomePatch::positionsReady(), HomePatch::positionsReady_SOA(), and Sequencer::runComputeObjects().
int Flags::doMinimize |
Definition at line 25 of file PatchTypes.h.
Referenced by copyIntFlags(), CudaComputeNonbonded::doWork(), and Sequencer::minimize().
int Flags::doMolly |
Definition at line 24 of file PatchTypes.h.
Referenced by copyIntFlags(), ComputeNonbondedSelf::doForce(), ComputePme::doWork(), ComputeHomeTuples< TholeElem, Thole, TholeValue >::doWork(), Sequencer::integrate(), Sequencer::integrate_SOA(), Sequencer::minimize(), ComputeNonbondedSelf::noWork(), Patch::positionsReady(), HomePatch::positionsReady(), HomePatch::positionsReady_SOA(), and Sequencer::runComputeObjects().
int Flags::doNonbonded |
Definition at line 22 of file PatchTypes.h.
Referenced by ProxyPatch::boxClosed(), HomePatch::boxClosed(), ExclElem::computeForce(), copyIntFlags(), HomePatch::doGroupSizeCheck(), HomePatch::doGroupSizeCheck_SOA(), CudaComputeNonbonded::doWork(), Sequencer::integrate(), Sequencer::integrate_SOA(), Sequencer::minimize(), ComputeNonbondedSelf::noWork(), HomePatch::receiveResult(), Sequencer::runComputeObjects(), and Sequencer::runComputeObjects_SOA().
int Flags::doVirial |
Definition at line 21 of file PatchTypes.h.
Referenced by copyIntFlags(), CudaComputeNonbonded::doWork(), Patch::forceBoxClosed(), Sequencer::integrate(), Sequencer::integrate_SOA(), Sequencer::submitHalfstep(), and Sequencer::submitReductions().
Lattice Flags::lattice |
Definition at line 45 of file PatchTypes.h.
Referenced by copyIntFlags(), ComputePme::doWork(), and ComputePme::ungridForces().
BigReal Flags::maxAtomMovement |
Definition at line 42 of file PatchTypes.h.
Referenced by ComputeNonbondedPair::doForce(), ComputeNonbondedSelf::doForce(), and HomePatch::doPairlistCheck().
int Flags::maxForceMerged |
Definition at line 33 of file PatchTypes.h.
Referenced by copyIntFlags(), ComputeNonbondedSelf::doForce(), Sequencer::integrate(), Sequencer::integrate_SOA(), and Sequencer::minimize().
int Flags::maxForceUsed |
Definition at line 32 of file PatchTypes.h.
Referenced by copyIntFlags(), Sequencer::integrate(), Sequencer::integrate_SOA(), Sequencer::minimize(), Sequencer::submitCollections(), and Sequencer::submitCollections_SOA().
BigReal Flags::maxGroupRadius |
Definition at line 43 of file PatchTypes.h.
Referenced by ComputeNonbondedPair::doForce(), ComputeNonbondedSelf::doForce(), HomePatch::doGroupSizeCheck(), and HomePatch::doGroupSizeCheck_SOA().
BigReal Flags::pairlistTolerance |
Definition at line 41 of file PatchTypes.h.
Referenced by ComputeNonbondedPair::doForce(), ComputeNonbondedSelf::doForce(), and HomePatch::doPairlistCheck().
int Flags::savePairlists |
Definition at line 40 of file PatchTypes.h.
Referenced by ComputeNonbondedSelf::doForce(), HomePatch::doPairlistCheck(), CudaComputeNonbonded::launchWork(), Sequencer::runComputeObjects(), and Sequencer::runComputeObjects_SOA().
int Flags::sequence |
Definition at line 18 of file PatchTypes.h.
Referenced by ProxyPatch::boxClosed(), copyIntFlags(), ComputeLCPO::doForce(), HomePatch::gbisComputeAfterP1(), HomePatch::gbisComputeAfterP2(), Patch::gbisP2Ready(), HomePatch::gbisP2Ready(), Patch::gbisP3Ready(), HomePatch::gbisP3Ready(), Patch::positionsReady(), HomePatch::positionsReady(), HomePatch::positionsReady_SOA(), Sequencer::runComputeObjects(), Sequencer::runComputeObjects_SOA(), and Sequencer::submitMinimizeReductions().
int Flags::step |
Definition at line 16 of file PatchTypes.h.
Referenced by HomePatch::buildRattleList(), HomePatch::buildRattleList_SOA(), AngleElem::computeForce(), CrosstermElem::computeForce(), ImproperElem::computeForce(), DihedralElem::computeForce(), TholeElem::computeForce(), AnisoElem::computeForce(), BondElem::computeForce(), ExclElem::computeForce(), copyIntFlags(), ComputeGridForce::do_calc(), ComputeEField::doForce(), ComputeStir::doForce(), ComputeNonbondedPair::doForce(), ComputeGridForce::doForce(), ComputeNonbondedSelf::doForce(), ComputeRestraints::doForce(), Sequencer::integrate(), Sequencer::integrate_SOA(), CudaComputeNonbonded::launchWork(), Sequencer::minimize(), Sequencer::runComputeObjects_SOA(), and ComputePme::ungridForces().
int Flags::submitLoadStats |
Definition at line 31 of file PatchTypes.h.
Referenced by copyIntFlags().
int Flags::usePairlists |
Definition at line 39 of file PatchTypes.h.
Referenced by ComputeNonbondedPair::doForce(), ComputeNonbondedSelf::doForce(), HomePatch::doPairlistCheck(), CudaComputeNonbonded::launchWork(), Sequencer::runComputeObjects(), and Sequencer::runComputeObjects_SOA().